KEGG   Pseudochrobactrum sp. XF203: LDL70_09205
Entry
LDL70_09205       CDS       T10521                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
psxf  Pseudochrobactrum sp. XF203
Pathway
psxf03020  RNA polymerase
Brite
Enzymes [BR:psxf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LDL70_09205 (rpoC)
Transcription machinery [BR:psxf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LDL70_09205 (rpoC)
DNA repair and recombination proteins [BR:psxf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LDL70_09205 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: UCA44578
LinkDB
Position
complement(2015587..2019789)
AA seq 1400 aa
MNQEVMNLFNPQAPVQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTA
LIGAEAIYDLLATMELEKIAVQLRTDLAETTSELKTKKLMKRLKIVENFMESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRTITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGLPIIVPSQDMVLGLYYLSIVAENEPGQGMVFADMGELQHALE
TKTVTLHTKIKGRFKSVDAEGKPVSKLFDTTPGRLILGELLPKNANVPFDICNQEMTKKN
ISKMIDLVYRHCGQKETVIFCDRVMQLGFAHACRAGISFGKDDMVIPDAKAKIVADTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWGKATDKIADEMMARIKAVEFDPETGRQKQMNSIY
MMSHSGARGSPSQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISEPDCGATVGLTMNPIVDAGQIVASLGMRILGRV
ALDDINHPATGELIVASGDMIEERHVEVIEKAGIQTVRIRSALTCLTRSGVCGKCYGRDL
ARGTPVNKGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASYEGTVALRNRN
VVRNSDGHLVVMGRNMAVLIMDASGKERASHRVTYGSRLFVDDGDAVKRGQRLAEWDPYT
RPIITEVEGVIEFEDMVDGLSVAENTDESTGITKRVVIDWRSTPRGSDLKPALVVKDKNG
KVAKLSKGGEARFQLSVETILSVEPGATVRVGDVIARLPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEVDGTIRFGRDYKNKRRIIIEPNDHNLEPVEYLIPKGKPFHLQDGDAIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVTINDKHIEVIVRQMLQKVE
ITESGDSTYIPGDHVDRIELDEINDRLVEDGKKPAEGLPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDTLQGLKENVIVGRLIPAGTGGMMSQIRRIATARDDLIIDERRK
TSGADAANAMLVDMTNNAAE
NT seq 4203 nt   +upstreamnt  +downstreamnt
atgaaccaagaggtcatgaatcttttcaatcctcaggctccggtgcagacattcgattcc
atccggatttcgattgccagccctgagaagattctgtcctggtcatacggcgagatcaaa
aagccagaaacgatcaactaccgtacgttcaaacctgaacgcgatggtctgttctgtgcc
cgtatcttcggcccgatcaaggactatgagtgcctgtgcggtaagtacaagcgcatgaaa
tacaagggcattatctgtgagaagtgcggcgttgaagtaacgctgtcacgcgtgcgccgt
gagcgcatgggccatatcgaactggctgctcctgttgcccatatctggttcctgaagtcg
cttccttcgcgtatcggcacattgcttgatatgacgctgaaggatatcgaacgcgttctg
tatttcgaaaactatatcgtaacagaaccaggcctgacttccctgaaagagcaccagctg
ctttcggaagaagaatatatgatcgctgttgatgaattcggtgaagaccagttcacagcg
ctgatcggtgcggaagcgatctatgatcttctggcgacaatggaactcgaaaagattgct
gtgcagctgcgcaccgatctggccgaaaccacttcggaactgaagaccaagaagctgatg
aagcgtctcaaaatcgttgagaacttcatggaatccggtaaccgtcctgagtggatgatc
atgaagatcgttccggtgatcccgccggatctgcgccctctggtgccgttggatggcggt
cgctttgcgacttccgatctgaacgacctttaccgtcgcgtgatcaaccgtaacaaccgt
ctgaagcgcctgatggagcttcgtgcgcctggcatcattatccgtaacgaaaagcgtatg
ctgcaggaagctgttgacgcgctgttcgataacggccgtcgcggtcgtaccattaccggt
gcgaataagcgtccgctgaagtcactttcggatatgctgaaaggtaagcagggtcgtttc
cgtcagaaccttcttggtaagcgcgtcgactattccggtcgttcggttatcgtgaccggt
cctgagctgaaactgcaccagtgcggtctgccgaagaaaatggctctggaactgttcaag
ccgtttatctacgcacgtcttgacgccaagggcttctcctcgactgttaaacaggcgaag
aagctggttgaaaaagaacgtccggaagtttgggatatccttgatgaggttatccgcgag
catccggttctgcttaaccgtgcgccgacgctgcaccgtcttggtattcaggctttcgaa
ccaacgctgatcgaaggtaaggcaatccagctgcacccgctcgtctgtactgcgtttaac
gcggacttcgacggtgaccagatggctgttcacgtgccgctgtcgcttgaagcacagctc
gaagcacgcgttctgatgatgtcgaccaacaatattctgcatccggcaaacggtcttccg
atcatcgtgccgtcgcaggatatggttctcggcctctattacctgtcgatcgttgctgaa
aacgaacctggtcagggcatggtcttcgccgatatgggcgaattgcagcatgcgctggaa
accaagaccgttacgctgcacaccaagatcaaaggccgcttcaaatctgttgatgcggaa
ggcaagcctgtatcgaaactctttgacacaacaccgggtcgtctgatcctcggtgaattg
ttgccgaagaacgccaatgttcctttcgatatctgcaatcaggaaatgaccaagaagaac
atctccaagatgatcgatctggtttaccgtcattgcggccagaaagagacagtgattttc
tgtgaccgcgtgatgcagctcggctttgcccatgcctgccgtgccggtatttccttcggt
aaggatgacatggtcattcctgatgccaaggcgaaaatcgttgccgatacagaagctttg
gccaaggaatatgaacagcagtacaatgacggtctgatcactcagggcgaaaaatacaac
aaggttgttgatgcctggggtaaagcgactgacaagatcgccgacgaaatgatggcccgc
attaaggctgttgaattcgatccggaaaccggtcgtcagaagcagatgaactccatctat
atgatgtcgcactccggtgcccgtggttcgccttcgcagatgcgtcagctcggcggtatg
cgcggtctgatggccaagccttcgggcgagattatcgaaacaccgattatctcgaacttt
aaagaaggtctgaccgtgaacgagtacttcaactcgacacacggtgcgcgtaagggtctg
gccgatacggctctgaaaaccgctaactccggttatctgacacgccgtctcgttgacgtt
gcgcaggatgcgatcatttctgaaccggattgcggtgcaaccgttggtctgacaatgaac
ccgatcgttgatgcgggtcagatcgtggcttcgctcggcatgcgtattctgggccgtgtt
gctctggacgacatcaatcatccggctacgggtgagctgattgttgcttccggtgacatg
atcgaagaacgtcatgtggaagtgatcgaaaaagccggtatccagaccgttcgtatccgt
tcggctctgacctgtctcacccgctccggcgtgtgcggcaaatgctatggtcgtgacctt
gcacgcggtactccggtgaacaaaggtgaagctgtcggtgttatcgctgcgcagtcgatc
ggtgagcctggtacccagctgaccatgcgtacgttccaccttggtggtacagcgcaggtt
gtggacagctcctatctggaagcttcctatgaaggtactgttgcactgcgtaaccgcaat
gtggttcgcaattccgacggtcatctggtggttatgggccgtaacatggccgttctcatc
atggatgcatccggcaaggaacgtgcaagccatcgtgtaacttacggttcgcgcctgttc
gtcgatgacggtgatgcagtgaaacgcggtcagcgtctggccgagtgggatccgtatacc
cgtccgatcatcaccgaagttgaaggtgtgattgagttcgaagatatggttgacggtctg
tcggttgctgaaaacaccgatgaatccaccggtatcaccaagcgcgttgttattgactgg
cgttcgaccccgcgtggttcggatctgaagcctgctctcgttgttaaagacaagaacggc
aaagttgcgaaactgtcgaagggtggtgaagcccgcttccagctctccgttgagaccatt
ctctcggttgagccaggtgcaacggttcgcgtcggtgacgtgattgcccgtctgcctatg
gaaagcgcgaagaccaaagatattaccggtggtctgccacgtgtggctgaactgttcgaa
gctcgtcgtccgaaggatcatgcgatcatcgctgaagttgatggtacaatccgtttcggc
cgcgattacaagaacaagcgccgcatcattattgaaccgaatgaccataatctggagccg
gttgaatatctgatccctaaaggcaagcctttccatcttcaggatggcgatgcgatcgaa
aagggtgattatattctcgacggtaatcctgcaccgcatgacattctggcgatcaagggc
gtggaagcacttgcttcttacctcgtgaacgaaattcaggaagtctatcgtctgcagggt
gtgacgatcaacgataagcatatcgaagtgatcgttcgtcagatgctgcagaaggttgag
atcacggaatccggtgacagcacctatattccgggcgatcatgttgaccgtattgaactt
gacgaaatcaatgatcgtctggttgaagacggcaagaagcctgctgaaggtctgccggtt
ctgctcggtattacgaaggcatcgttgcagacaccttccttcatctcggctgcttccttc
caggaaacaacccgcgttctgactgaagcggcagttgctggtaagatggatacgctgcag
ggtctgaaggaaaacgtgattgttggtcgtctgatccctgccggtaccggcggtatgatg
agccagatccgtcgtattgcgacagcccgcgatgatttgattatcgatgagcgccgcaaa
acttccggtgcggatgctgcaaatgcaatgctggtcgacatgaccaataatgcagcggaa
taa

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