Pseudochrobactrum sp. XF203: LDL70_09970
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Entry
LDL70_09970 CDS
T10521
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf03420
Nucleotide excision repair
psxf03430
Mismatch repair
Brite
Enzymes [BR:
psxf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDL70_09970
DNA repair and recombination proteins [BR:
psxf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LDL70_09970
MMR (mismatch excision repair)
Other MMR factors
LDL70_09970
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UCA44709
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Position
2183555..2186170
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AA seq
871 aa
AA seq
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MSDFPDDIPFFGEPDVPATPKPQSGPKAGIAARAMQARNQQRGEPDYLQGLNPEQRQAVE
TTEGPVLVLAGAGTGKTRVLTTRIAHIIQQGLAFPSQILAVTFTNKAAREMKERIGHLLG
GAVEGMPWLGTFHSIGVKMLRRHAELAGLRSDFTILDTDDVIRLLKQLIQAEGLDDKRWT
PRSFSMMIDGWKNKGYGPSEISEGDARAFANGKGRELYYAYQERLKTLNACDFGDLLLHP
IRIFRKHPDILREYHARFRYILVDEYQDTNTAQYMWLRLLAQRPSSNANTQSASTQPHST
PNATDWSSEPMRGPHGAGEHSELGVSAKKSTQQINICCVGDDDQSIYGWRGAEVDNILRF
DKDFPGATIIRLERNYRSTPHILGAASYLIAHNEGRFGKTLLPQAASEDDQKVHVHAAWD
SEEEARAVGEEIEQAQRRGHLLNDMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYER
QEIRDAMAYFRVVAQPADDLAFERIVNTPKRGLGEASLRLVHDYARAKNMPMLQAAEDLI
ATEELKPKARSALREVVENFRRWQGLLDNKSHTELAEIILDESGYTAMWQNDRSAEAPGR
LENLKELIRSMEEYESLRGFLEHVALVMDTEQNEGMDAVSIMTLHSAKGLEFKTVFLPGW
EEGLFPHQRALDEGGRSGLEEERRLAYVGLTRAKKNLHIWFVSNRRIHGMWQTTIPSRFL
EELPEEHVDIAESDSSYGGGYGQSRFDAVGRGDPFANSYSTPGWQRAQQNRTDATRNNWG
SRSGANVERIGYGETDSGFGAGRGSVKGKVIDGELVAKSVSSTPSDFKVGDRVFHMKFGN
GNVASIDGNKLTIDFDHAGQKRVIDSFVKRV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttccagacgatattcccttcttcggggagccggatgtaccggctacacct
aaaccgcaatctggtccaaaagccgggattgccgcgcgggctatgcaggcgcgcaaccag
caacgcggtgaaccagattatctgcaagggctaaaccctgagcagcggcaggcggtcgaa
acgactgaagggccggttctggttctggccggtgcgggcaccggcaaaacccgtgttctg
accacgcgtattgcgcatattattcagcagggtttggcattcccaagccagatccttgca
gtgacttttaccaataaagccgcacgcgagatgaaagaacgtatcggccaccttcttggc
ggtgcggttgaaggtatgccatggctcggtactttccactctatcggggtgaagatgctg
cgccgtcacgcggaactggccggactgcgctctgactttaccattcttgatacggacgat
gtgatccgcctgctcaagcagcttattcaggctgaagggctggatgacaaacgctggacg
ccgcgctccttctcgatgatgatcgatggctggaagaataaaggctatggcccgtctgaa
atttcggagggtgatgcccgtgcttttgccaatggcaaaggacgtgaactttattatgcc
tatcaggaacggctgaaaacgctgaatgcctgtgatttcggtgatcttctgctgcatccg
atccggattttccgcaaacatccggacattctgcgcgaatatcatgcacgtttccgctat
attctggtggatgagtatcaggataccaataccgcacaatatatgtggctgcgactgctg
gcgcaaagacctagctctaacgcaaacacccaatcagcatcaacacaaccacatagcact
cccaacgcgaccgactggtcgtccgagcctatgcgaggccctcacggagccggtgagcat
agcgaactcggcgtgagtgcaaaaaaatcaacacaacagattaacatctgttgtgttggc
gatgacgatcaatcgatctatggctggcgcggggcggaagtcgacaatattctgcgcttt
gacaaagattttcctggcgcaacaattattcgtctcgagcgcaattaccgttccacgccg
catattctgggcgcggcctcctatctgatcgcccataatgaagggcgctttggcaaaaca
ctgctgccgcaggcagccagtgaagatgatcagaaagtgcatgtgcatgcggcttgggac
tcagaggaagaagcccgtgcggtcggtgaagagatagaacaggcgcagcgtcgcggtcat
ctgcttaatgatatggctattctggtgcgtgcctcgttccagatgcgtgagtttgaagac
cgtttcgtaactctcggcctgaattaccgcgttatcggcggcccgcgcttctatgagcgt
caggaaatccgcgatgcgatggcctatttccgcgttgttgcccagcctgccgatgatctg
gcctttgagcgcatcgtcaacacgccgaaacgcggtcttggtgaagccagcctgcgctta
gtgcatgattatgcacgcgcaaaaaatatgccgatgctgcaggcggcagaagatctgatt
gccacggaagaactgaaaccaaaagcccgctcggcactgcgtgaagtggtcgagaacttc
cggcgctggcagggattgctggataacaagtctcatacagaactggcagagatcattctc
gatgaatccggctatacggcgatgtggcagaatgaccgttctgccgaagcaccgggacgt
ctggaaaacctcaaagaactcatccgctccatggaagaatatgaaagcctgcgcggcttt
ctcgaacatgtggcgctggtgatggatacggaacagaatgaaggcatggatgctgtcagc
atcatgacccttcattcggccaaaggtctggaatttaaaactgtgttcttaccgggctgg
gaagaaggtctgttcccgcatcagcgtgcgctggatgaaggcggtcgctcaggtttggaa
gaagagcgccgcctcgcctatgtcggcctgacccgcgccaagaaaaatctgcatatctgg
tttgtgtccaaccgccgtattcacggcatgtggcagaccacgatcccgtcccgttttctt
gaagaattgccggaagagcatgtggatattgcggaatccgacagttcctatggcggcggt
tatggccagtcacgctttgatgccgtgggacgcggtgatccgtttgccaattcttattcc
acaccgggctggcagcgggcgcagcaaaaccgcaccgatgcgacgcgcaacaattggggc
tcccgctccggtgccaatgttgagcgcatcggctatggcgaaacggattccggcttcggt
gccggtcgcggttcagtcaaaggcaaagtgattgacggcgagttggtggcaaaatctgtt
tcctcaacgccgtcagactttaaggtcggcgatcgtgttttccatatgaaattcggcaac
ggcaatgtcgcctcaattgacggcaacaagctgaccatcgactttgaccatgccggacaa
aaacgcgtcatcgacagctttgtgaaacgggtataa
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