Pseudochrobactrum sp. XF203: LDL70_10080
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Entry
LDL70_10080 CDS
T10521
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf00470
D-Amino acid metabolism
psxf00550
Peptidoglycan biosynthesis
psxf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL70_10080 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LDL70_10080 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psxf01011
]
LDL70_10080 (murD)
Enzymes [BR:
psxf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LDL70_10080 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psxf01011
]
Precursor biosynthesis
Amino acid ligase
LDL70_10080 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
KARI_N
MurD-like_N
NAD_binding_2
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UCA47245
LinkDB
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Position
complement(2212546..2213955)
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AA seq
469 aa
AA seq
DB search
MIPTLTLKDKAVALFGLGGSGIATAKAMIAGGVKVVAWDDNPDSVTRAVAEGILTQNLRE
ADWSGFSAFILSPGVPLTHPQPHWSAELAHQMQVPVIGDVELFCRERNAALAAGDDVPFV
AITGTNGKSTTTALIAHIIKASGRDMQLGGNIGTAVLSLEVPADGRNYVVECSSYQIDLA
PSLNPTAGILLNLTPDHLDRHGTMENYAAIKERLVAGSDTAIVAIDDAYCVAIADRLEKA
GKKLIRFSKDQVLQDGYYAQGAQIYRAQNGKAELLLSLEGIGSLRGAHNAQNALAAIIAC
LTVGLSLDEIRTGLRSFPGLAHRMEQVGHQGKTLFINDSKATNAEATAPALSSFPQLYWI
AGGLPKSGGIESLRTFFPRITKAYLIGEAAAQFAATLGNDVPFEISHTLDAAIDHAALDA
AQDAADEPVVLLSPACASFDQFPNFEKRGAAFRDKVMTLQGFAPIGRAD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgacactgaccctcaaagataaagctgttgcgctgtttggccttggtggttcc
ggtattgcaacggcgaaagctatgatcgccggcggcgtgaaggttgtggcatgggatgat
aatccggacagtgttacccgtgcggtagcggaaggcattctcacacagaatttgcgcgag
gcagactggtcgggcttcagtgcatttatcctctctcccggcgtgccgctgacccatccg
cagccgcattggagcgcggaactggcacatcagatgcaggtgccggttatcggtgatgtc
gaactgttctgccgtgaacgcaatgcagcgctggctgcaggcgatgatgtgccatttgtc
gccattaccggcaccaatggcaaatccactacaactgccctgatcgcgcatattatcaaa
gcctcaggccgtgatatgcaactcggcggcaatatcggtactgctgtattgtcgcttgaa
gtaccggcagatggccgtaattatgtggttgagtgttcgtcttatcagattgatctggcg
ccttcactcaatccgacagcgggtattttactgaacttgacgcccgatcacctcgaccgt
cacggcacaatggaaaattatgccgccattaaagaacgtctggttgcaggtagtgatacg
gcgattgtcgccattgatgatgcttattgtgttgccattgctgaccggctggaaaaagct
ggcaaaaagctgatccgtttttccaaagatcaggttttgcaggacggttattatgcgcag
ggcgcacagatttatcgcgcacagaatggcaaggccgaattgctgttgtctctggagggc
atcggttctctgcgcggtgcgcataatgcacaaaatgctttggccgcaatcatcgcatgc
ctgactgtcggtctgagccttgatgaaatccgtaccggtctgcgcagttttccggggctt
gctcatcgtatggagcaggtcggccatcagggtaaaaccctgtttatcaatgattcaaaa
gccaccaatgcggaagcaactgcgcctgcactgtcgtctttcccgcaactttactggatt
gcgggcggcctgccgaaaagcggtggcattgaaagtctgcgcaccttcttcccgcgcatt
accaaagcctatctgatcggtgaagcggcagcgcaatttgcggctactctgggcaatgat
gtgccgtttgaaatcagccatacgctggatgctgccattgaccatgcagccttggacgcg
gcacaggatgcggcagatgaacctgtggtattgctgtcaccggcctgcgccagttttgac
cagtttccgaattttgaaaaacgcggcgcagcattccgcgataaagtcatgacgctgcag
ggatttgcaccgatcgggagggcagactga
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