Pseudochrobactrum sp. XF203: LDL70_10860
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Entry
LDL70_10860 CDS
T10521
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psxf Pseudochrobactrum sp. XF203
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psxf03400
]
LDL70_10860
Enzymes [BR:
psxf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LDL70_10860
DNA repair and recombination proteins [BR:
psxf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LDL70_10860
Prokaryotic type
LDL70_10860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Leptin
Motif
Other DBs
NCBI-ProteinID:
UCA44865
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All DBs
Position
complement(2379637..2381055)
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AA seq
472 aa
AA seq
DB search
MKNHSLIWLRNDLRMQDNPALDAALLAGGSVTAVYIHEETGISRCPGGAARWWLERSLEK
FAAQLAQKNIELIIETGDPAIIIEHIVTTEHVKAVFWNRRYAHTERECDADIKHNLKGKG
IHVASFRGNLLIEPWEVMTGNGDPYQVYTPYAKALRRQGVLQPRAISAQMAASRNCVQHQ
PVMIYKQPHWAHTIAQHWQTGEEVGYQRLTVFLKDLVRSYADDRDCPSLDGTSKLSPYMR
FGQMSVRQIWHEVVQFTQQHPHVANGADKFLSELIWRDFQYHQLYHRADITTHDMRPTLE
PIEWRKDPASFIAWTKGQTGIPIIDAGMRQLWATGWMHNRVRMLVASFLTKNLMIDWRLG
EELFWDTLVDADVASNPASWQWVAGCGMDAAPYFRVFNPVVQGKRFDPEGAYVRQWVPEL
RLLPTKWIHSPEQAPADVLRGAKLKLGTDYPLPIADIAESQRFFKMIMKNEI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcatagtcttatatggttgcgcaatgaccttagaatgcaagataatccggca
cttgatgcggcattgttagcgggcggatctgttacagccgtttatatccatgaggaaaca
ggaatttcgcgctgtcctggcggcgctgcgcgatggtggcttgagagaagccttgaaaaa
tttgctgcgcaattggcgcaaaaaaatatcgaattaataattgagacaggtgatccggcg
attatcatagaacatatcgtaacaacggagcatgttaaagctgtcttctggaacaggcgt
tatgcgcatacagagcgtgaatgcgacgcagatataaaacataacctcaaaggcaaaggt
atccatgttgcctcattcaggggtaatttattgatcgaaccttgggaggttatgactgga
aacggtgacccctatcaggtttatacaccctatgccaaagccttgcgccggcaaggtgtt
cttcagcctcgtgctatatcggctcagatggcagcctccagaaattgcgtgcagcaccag
ccggttatgatttataaacaaccgcactgggcacacacaattgcccagcattggcaaacc
ggcgaggaggtgggttaccagcgtttgaccgtatttttgaaagatctggtccggtcttat
gcggatgaccgcgactgtccttctcttgacggcacttcaaaactttcgccttatatgcgc
ttcgggcagatgagtgtgcgccagatatggcatgaagttgttcagttcacgcagcagcat
ccgcatgtggcaaatggtgctgataagtttttgtccgagttgatctggcgtgatttccag
taccatcaactttatcacagagcagatattaccacgcatgatatgcgcccgacacttgaa
ccaattgagtggcgcaaggatcccgcatctttcattgcatggacaaaaggacagaccggc
ataccgattattgatgctggaatgcgtcaattgtgggcaacaggatggatgcataatcgt
gtcagaatgcttgtggcgtcatttctgacgaaaaatcttatgatcgactggcgtcttggg
gaagagttgttctgggatacgctggttgacgctgatgtggccagcaatcctgccagttgg
caatgggttgcgggatgcgggatggatgctgccccgtattttcgggtttttaaccctgtc
gtgcaaggaaaacgcttcgatccagaaggtgcttacgtgcgtcaatgggtgcctgaactg
cgcttattgcccacaaaatggatacacagtccggagcaagcgcctgctgatgtcttgcgc
ggagcaaaactgaaattgggcaccgattatccgttgccgattgcggatattgcagaaagc
cagaggttcttcaagatgattatgaagaacgagatttag
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