Pseudochrobactrum sp. XF203: LDL70_11750
Help
Entry
LDL70_11750 CDS
T10521
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf00630
Glyoxylate and dicarboxylate metabolism
psxf00680
Methane metabolism
psxf01100
Metabolic pathways
psxf01120
Microbial metabolism in diverse environments
psxf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LDL70_11750 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LDL70_11750 (fdhF)
Enzymes [BR:
psxf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LDL70_11750 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_6
Fer4_9
Fer4_21
Fer4_15
Fer4_16
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
UCA45018
LinkDB
All DBs
Position
complement(2590110..2592995)
Genome browser
AA seq
961 aa
AA seq
DB search
MSLIKEIDYGTPVSRSEKMVTLTIDGNQVTVPEGTSIMRASMEAGIAIPKLCATDMVDAF
GSCRLCLVEIEGRNGTPSSCTTPVMEGQVVHTQTGRLKSLRKGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGQDGANHVFKQGRNDGALNAKWMPKDESNPYFTYDPSKC
IVCSRCVRACEEVQGTFALTIEGRGFNSRVSPGMHESFLGSECVSCGACVQACPTATLTE
KSVIEIGQPEHSKVTTCAYCGVGCSFKAEMRGEELVRMVPYKDGKANRGHSCVKGRFAYG
YAHHKDRILKPMIREKITDPWREVSWEEAYGRVASEFKRLQTQYGRNSIGGITSSRCTNE
ETFLVQKLIRAGFGNNNVDTCARVCHSPTGYGLNQTFGTSAGTQDFDSVEHTDVVMVIGA
NPTDGHPVFGSRLRKRLRQGAKLIVIDPRRIDLVRSPHIEAAYHLALRPGTNVAIMTALA
HVIVTEGLQDDAFIRERCENEEFRDWVEFVSQPQYSPEAVELLTGVPAQEVRGAARLFAT
GGNGAIYYGLGVTEHSQGSTTVMAIANLAMVTGNIGRKGVGVNPLRGQNNVQGSCDMGSF
PHELPGYRHISDPATREIYENIWGVILQDEPGLRIPNMLDAAVEGTFKGIYIQGEDILQS
DPDTRHVAAGLEAMECVVVQDLFLNETANFAHVFLPGSTFLEKDGTFTNAERRINRVRKV
MTPTNGYADWEVTQNLARAMGLNWNYTHPSQIMDEIAMTTPTFANVSYELLEREGSVQWP
CNAKAPLGTPVMHIDHFVRGKGKFMRTEYVATDERSGPRFPLLLTTGRILSQYNVGAQTR
RTENVAWHAEDRLEIHPHDAEVRGLRDGDWVKIASRSGETTLRALVTDRVTPGVVYTTFH
HPTTQANVVTTDFSDWATNCPEYKVTAVQISASNGPTQWQQEYREHSDASRHIETALDTV
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaattaaagaaatcgattacggcacacctgtttcacgctcggaaaaaatggtg
accctgaccatcgacggtaatcaggtgactgtgccggaaggcacctcgatcatgcgggct
tcgatggaagccggcattgccattccgaagctttgcgccaccgatatggtggatgcgttt
ggttcctgccgtctgtgcctcgtagaaattgaaggccgtaacggcacgccgtcttcctgt
accacgccggtgatggaagggcaggtggttcatacccagaccggccgtctgaaatctttg
cgcaaaggcgtgatggagctttatatctccgatcatccgctggactgtctgacctgcgct
gccaatggcgattgcgaattgcaggatatggccggtgctgtgggcttgcgtgatgtgcgc
tacggtcaggacggcgcgaaccatgttttcaaacaaggccgcaatgacggtgcgctgaat
gcaaaatggatgccgaaagacgagagcaatccgtatttcacctatgatccgtccaaatgt
attgtctgctcacgctgcgtgcgtgcctgtgaggaagtgcagggaactttcgcgctgacc
attgaggggcgtggtttcaactcccgcgtttcaccgggcatgcatgagagcttcttaggc
tcggaatgtgtgtcttgcggtgcctgtgtacaggcttgtccgacggcaacgctgacagaa
aaatcggtgatcgaaatcggtcagccggaacattccaaagtcacgacctgtgcttattgc
ggtgtcggttgctcctttaaagcggaaatgcgcggcgaagaactggtgcgtatggtgccg
tataaagacggtaaggccaatcgcggccattcctgtgttaaaggccgctttgcttacggt
tacgcccatcacaaagaccgtattctcaaaccgatgatccgtgaaaagatcaccgatcct
tggcgcgaagtgtcatgggaagaagcctatggccgtgtggccagcgagtttaaacgcttg
cagacccagtacggacgcaattccatcgggggtattacctcgtcacgctgcaccaatgaa
gaaacctttcttgtgcagaaactgatccgtgccggtttcggtaataacaatgtcgatacc
tgtgcgcgtgtttgtcactcgccgaccggctatggtctgaaccagacttttggtacctct
gcggggacgcaggattttgacagtgttgaacatactgatgtggtgatggtgatcggtgcc
aacccgaccgacggccatccggtatttggctcgcgtttgcgtaagcgtttgcgccaaggt
gccaagctgatcgtgattgatccgcgtcgtattgatctggtgcgttcgccgcatattgag
gcggcatatcatctggcactgcgtccgggtaccaatgtggcgatcatgacggcgctggcg
catgtgattgtaacggaaggtctgcaggatgatgccttcatccgcgagcgttgcgagaat
gaagagttccgcgattgggtggaatttgtttcccagccgcaatacagcccagaggctgtg
gagctgctgaccggtgttccggcgcaagaagtgcgcggcgcagcccgtctgtttgcgacc
ggcggcaatggtgcaatctattatggtcttggtgtaaccgagcatagtcagggttccact
actgtgatggcgattgccaatcttgcgatggtcaccggtaatatcggccgcaaaggcgtg
ggtgtgaacccgctgcgcggtcagaacaatgtgcagggctcttgcgatatgggctcattc
ccgcatgaattgccgggctatcgtcatatctctgatcctgcaacccgtgagatttatgaa
aatatctggggcgtgatcctgcaggatgagccgggtctgcgtattccgaatatgctggat
gcggcggtggaaggcactttcaagggcatctatattcagggtgaggacattcttcagtcc
gatccggatacccgccatgtggccgccggactggaggctatggaatgtgtggtggtgcag
gatctgttcctcaatgagaccgccaatttcgcccatgttttcctgccgggttcgaccttc
cttgaaaaggacggcacattcaccaatgcggaacgccgtatcaaccgtgtgcgcaaggtg
atgacaccaaccaacggctatgctgactgggaagtgacgcaaaaccttgcccgtgcaatg
ggactgaactggaactatacgcatccgtcgcagatcatggacgaaattgccatgaccacg
ccgacatttgccaatgtgtcctatgaattgctggaacgtgaaggttcggtgcagtggcca
tgtaatgctaaagcaccgctcggtactccggtgatgcatattgaccatttcgtgcgcggc
aaaggcaaattcatgcgcacggaatatgtggcaaccgatgagcgctcgggcccgcgtttc
ccgctgctgctcaccacagggcgtattctctcgcaatataatgtgggtgcacagacccgc
cgtaccgaaaatgtggcatggcatgcggaagaccgtctggaaatccatccgcatgatgcg
gaagtacgtggtttgcgcgatggtgactgggtgaaaattgccagccgttccggtgaaacc
actttgcgggcgctggtcacagaccgtgtgacaccgggtgtagtctacacgaccttccac
catccgaccacacaggccaatgtggtgaccacggatttctcggactgggcgaccaactgt
ccggaatataaggtaactgcggtgcagatcagcgcatccaacggcccgacacaatggcag
caggaatatcgtgaacattccgatgccagccgccatattgaaacagctttggatacggtg
agctaa
DBGET
integrated database retrieval system
