KEGG   Pseudochrobactrum sp. XF203: LDL70_12485
Entry
LDL70_12485       CDS       T10521                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psxf  Pseudochrobactrum sp. XF203
Pathway
psxf00300  Lysine biosynthesis
psxf00470  D-Amino acid metabolism
psxf01100  Metabolic pathways
psxf01110  Biosynthesis of secondary metabolites
psxf01120  Microbial metabolism in diverse environments
psxf01230  Biosynthesis of amino acids
Module
psxf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psxf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LDL70_12485 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LDL70_12485 (dapF)
Enzymes [BR:psxf01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LDL70_12485 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase CntK_N
Other DBs
NCBI-ProteinID: UCA45145
LinkDB
Position
complement(2742192..2743106)
AA seq 304 aa
MRPYSEAAQTGAAGIFFVKTHGLGNDFVLVDGREKSFRPQAAIIAQICDRHRGVGGDQLL
VLEAPQNARADVRMRIYNVDGMEAPACFNASRCAAFLWMQEAGKNSVILETLGGLIEARM
AEAENGQPRISLYLAPAVTDWQAIPLAGPLANHDGLLNHGPLSEPFAVSMGNPHLVYFVP
DFDAVDVSLEAAIVQNSTYLPEQANIGVAELLPSEGEEALLKLVVYERPGILTEACGSGA
CAAAVAAVRSGRTNQKKFRVLMPGGALQVELCADDTIILTGDVAVAFYGFLPEEASTEFN
KDNA
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcggccatattccgaagcggcgcaaacaggcgcagcaggaattttcttcgtcaagacc
cacgggctggggaatgactttgtgcttgttgacggtcgggaaaagtctttccggccgcag
gcagcaataattgcccagatttgtgatcgtcatcgcggtgttggtggcgatcagttgctg
gtgctggaagccccgcaaaatgcccgcgctgatgtgcggatgcgcatctataatgtggat
ggcatggaggctccggcctgttttaatgccagccgttgtgccgcttttctctggatgcag
gaagcaggcaaaaattccgtcattttagaaacgcttggtggcttgatcgaagcccgtatg
gcagaggcagaaaacgggcagccgcgtatcagcctgtatctggcgccagctgttacagac
tggcaggctattccgctggcagggccgcttgcgaaccatgacgggctcttgaaccacggc
ccgttgtctgaaccttttgccgtcagtatgggcaatccgcatctggtatattttgtgccg
gattttgatgccgtggatgtgtcgcttgaagctgccattgtgcaaaacagtacctatctg
ccggagcaggcgaatattggtgtggctgaactgctgccgtctgaaggtgaagaggcgctg
ctgaaactggtggtttatgaacgtcccggtattctcacggaagcctgtggtagcggtgcc
tgtgcggcggcagttgcggcggtacgcagcggacgcacaaatcagaaaaaattccgtgtt
ttaatgccgggcggggctttacaggtcgagttatgtgctgatgatacaattatcctgaca
ggggatgttgctgtcgcattttacggatttctgcctgaggaagcatcaacagaattcaat
aaggataacgcataa

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