Pseudochrobactrum sp. XF203: LDL70_12485
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Entry
LDL70_12485 CDS
T10521
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf00300
Lysine biosynthesis
psxf00470
D-Amino acid metabolism
psxf01100
Metabolic pathways
psxf01110
Biosynthesis of secondary metabolites
psxf01120
Microbial metabolism in diverse environments
psxf01230
Biosynthesis of amino acids
Module
psxf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDL70_12485 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL70_12485 (dapF)
Enzymes [BR:
psxf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LDL70_12485 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UCA45145
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Position
complement(2742192..2743106)
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AA seq
304 aa
AA seq
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MRPYSEAAQTGAAGIFFVKTHGLGNDFVLVDGREKSFRPQAAIIAQICDRHRGVGGDQLL
VLEAPQNARADVRMRIYNVDGMEAPACFNASRCAAFLWMQEAGKNSVILETLGGLIEARM
AEAENGQPRISLYLAPAVTDWQAIPLAGPLANHDGLLNHGPLSEPFAVSMGNPHLVYFVP
DFDAVDVSLEAAIVQNSTYLPEQANIGVAELLPSEGEEALLKLVVYERPGILTEACGSGA
CAAAVAAVRSGRTNQKKFRVLMPGGALQVELCADDTIILTGDVAVAFYGFLPEEASTEFN
KDNA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcggccatattccgaagcggcgcaaacaggcgcagcaggaattttcttcgtcaagacc
cacgggctggggaatgactttgtgcttgttgacggtcgggaaaagtctttccggccgcag
gcagcaataattgcccagatttgtgatcgtcatcgcggtgttggtggcgatcagttgctg
gtgctggaagccccgcaaaatgcccgcgctgatgtgcggatgcgcatctataatgtggat
ggcatggaggctccggcctgttttaatgccagccgttgtgccgcttttctctggatgcag
gaagcaggcaaaaattccgtcattttagaaacgcttggtggcttgatcgaagcccgtatg
gcagaggcagaaaacgggcagccgcgtatcagcctgtatctggcgccagctgttacagac
tggcaggctattccgctggcagggccgcttgcgaaccatgacgggctcttgaaccacggc
ccgttgtctgaaccttttgccgtcagtatgggcaatccgcatctggtatattttgtgccg
gattttgatgccgtggatgtgtcgcttgaagctgccattgtgcaaaacagtacctatctg
ccggagcaggcgaatattggtgtggctgaactgctgccgtctgaaggtgaagaggcgctg
ctgaaactggtggtttatgaacgtcccggtattctcacggaagcctgtggtagcggtgcc
tgtgcggcggcagttgcggcggtacgcagcggacgcacaaatcagaaaaaattccgtgtt
ttaatgccgggcggggctttacaggtcgagttatgtgctgatgatacaattatcctgaca
ggggatgttgctgtcgcattttacggatttctgcctgaggaagcatcaacagaattcaat
aaggataacgcataa
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