Pseudochrobactrum sp. XF203: LDL70_13075
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Entry
LDL70_13075 CDS
T10521
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psxf Pseudochrobactrum sp. XF203
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psxf03021
]
LDL70_13075 (rpoH)
Transcription machinery [BR:
psxf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LDL70_13075 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
UCR_14kD
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UCA45243
LinkDB
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Position
2870549..2871424
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AA seq
291 aa
AA seq
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MARATLPAITAGDGGLTRYLDEIRRFPMLQPQEEYMLAKRYSEHADPEAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPERGFRLATYAMWWIKASIQEYVLRS
WSLVKMGTTANQKRLFFNLRKAKNKIQALDDGDLNPEQVKEIAHRLSVSEEEVVSMNRRM
SGDASLNAPIRASEGESGEWQDWLVDDSASQEQVLIDEDELNSRRTMLESAMSKLNDRER
RIFEARRLAEEPVTLEDLSTEFGISRERVRQIEVRAFEKVQEAVMASAEAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgcaactttaccggctatcaccgcaggtgatggtggtctgacacgatatctc
gatgaaatccgccgcttcccgatgcttcagcctcaggaagaatatatgcttgcaaaacgc
tatagcgagcatgctgatccggaagcagcccataagcttgttaccagtcacctgcgtctc
gtggccaagattgccatggggtatcgcggctacggcctgccgatcggtgaagtgatctct
gaaggcaatgtcggcctgatgcaggctgtcaaacgttttgaaccggaacgcggcttccgc
ctcgcgacctatgctatgtggtggatcaaggcctcgattcaggaatatgtgctgcggtcg
tggagccttgtcaaaatgggcaccaccgcaaaccagaagcgcctgttctttaacctgcgt
aaggctaagaataagattcaggcgctggatgacggcgatctgaaccctgaacaggtgaaa
gaaattgctcaccgcctgagcgtttctgaggaagaagtcgtatccatgaaccgccgcatg
agcggcgacgcgtctctgaatgcgccgatccgcgcttcggaaggtgaaagcggtgaatgg
caggactggctggtggatgacagcgcctctcaggaacaggttctgattgacgaagacgag
ctcaacagccgccgcaccatgcttgaatcagcaatgtccaagctcaatgaccgcgaacgc
cggatttttgaagcccgtcgtctggcagaagaaccggttacgcttgaagatttgtcgacc
gaattcggcatcagccgtgagcgtgtccgtcagattgaagtccgcgcttttgaaaaagta
caggaggctgtcatggcctctgctgaagctgcataa
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