Pseudochrobactrum sp. XF203: LDL70_14735
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Entry
LDL70_14735 CDS
T10521
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LDL70_14735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psxf03400
]
LDL70_14735
Enzymes [BR:
psxf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LDL70_14735
DNA repair and recombination proteins [BR:
psxf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LDL70_14735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UCA45523
LinkDB
All DBs
Position
complement(3219477..3220283)
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AA seq
268 aa
AA seq
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MSFSVATWNINSVRLRLPLVLDFLEKHTPDVLCLQETKCPDNQFPLKELCNAGYEHIAIS
GQKGYHGVATLSRRPMENTETIGFCDMGDCRHLSSVVQAGGKSIRIHNFYVPAGGDEPDV
TINPKFAHKLNFLEEMRAVTADRGDGFSSILVGDLNIAPLENDVWSHKQMLKIVSHTPVE
TETLEDLRVKGGWSDLMRQVIPADQKIYTWWSYRAKDWDASDRGRRLDHVWGSKDLEPHM
KELQVLRHARGWERPSDHVPVIARFDLD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgtcgccacctggaatatcaattcagttcgccttcgtttgccgctggtt
ctggactttctggagaagcacacaccggatgtgttgtgcctgcaggaaaccaaatgtcct
gataaccagtttccgctcaaagagctgtgtaacgccggttatgaacatatcgcgatcagc
ggtcagaagggctatcacggcgtggccacactgtcgcgcaggccgatggaaaatacggaa
actattggcttctgtgatatgggggactgccgccatctcagcagtgttgtgcaggcgggt
ggtaaatcaatccgcatccataatttctatgtgcctgccggcggggatgagccggatgtg
acgatcaatccgaaatttgcccataagctgaatttccttgaggaaatgcgggcagtaacg
gcagatcgcggtgatggtttttcttctattctggtgggcgatctcaatattgcaccgctg
gaaaatgatgtctggtcacataagcagatgctgaaaattgtcagccatacgccggttgaa
accgagacactggaagatttgcgggtgaaaggtggctggagtgatctgatgcggcaggta
atccctgcagatcagaaaatttatacatggtggagctaccgagccaaagattgggatgca
tctgatcgcggccgtcgtctcgatcacgtctggggttccaaagatcttgaaccgcatatg
aaagaattgcaggttctgcgccatgcccgtggctgggagcggccttccgatcacgtgccg
gttattgcccgcttcgatctcgactga
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