KEGG   Pseudochrobactrum sp. XF203: LDL70_14900
Entry
LDL70_14900       CDS       T10521                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psxf  Pseudochrobactrum sp. XF203
Pathway
psxf00300  Lysine biosynthesis
psxf00470  D-Amino acid metabolism
psxf01100  Metabolic pathways
psxf01110  Biosynthesis of secondary metabolites
psxf01120  Microbial metabolism in diverse environments
psxf01230  Biosynthesis of amino acids
Module
psxf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psxf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LDL70_14900 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LDL70_14900 (dapF)
Enzymes [BR:psxf01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LDL70_14900 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N PhzC-PhzF PmbA_TldD_2nd
Other DBs
NCBI-ProteinID: UCA47323
LinkDB
Position
complement(3251071..3251955)
AA seq 294 aa
MSVDAAFAKMNGLGNKIIVADMRGRSDRITPDAARALNADAATGFDQIMAIHDPKTAGTD
YYIRIINCDGSEAQACGNGTRCVVQALAAETGKSQFTFETLAGLLLAEELPDGQIRVDMG
KPRFEWQAIPLAEEFRDTRMIELQIGPIDAPVLHSPSVASMGNPHAIFWVDQDVWSYELD
KFGPLLENHPIFPEKANISIAQVTGKDELTIRTWERGVGLTRACGSAACAAGVSAARTRR
TGRNVKVIVPGGPLQIDWRDDDHVLMTGPAEWEFSGQFDPATGLWAKDTTAEGA
NT seq 885 nt   +upstreamnt  +downstreamnt
atgtcagttgatgctgcttttgccaaaatgaatggccttggcaataaaattattgtggcg
gatatgcgcggccggagtgaccggatcacgcctgatgctgcgcgcgcactgaatgctgat
gctgcgaccggttttgaccagatcatggcgatccatgatccgaaaacggcgggtacggat
tattatatccgcattattaattgcgatggcagtgaagcgcaggcttgcggcaatggcaca
cgctgtgtggtgcaggcacttgcggcggaaaccggcaaatcgcaatttacctttgagaca
ctggcaggtttgttgctggccgaggaactgccggacggccagatccgtgtcgatatgggc
aagccgcgtttcgaatggcaggctattccgcttgcagaagaatttcgtgatacccgcatg
atcgaattgcagatcgggccgattgatgcaccggtgctgcattcgccgtctgtggcttcg
atgggcaatcctcatgcgattttctgggtggatcaggatgtctggtcctatgagctggat
aagttcgggccattgctggaaaatcatccgatctttccggaaaaagcaaatatttctatc
gcgcaggttacaggcaaagacgagctgaccatccgcacctgggagcgtggtgttggtctg
acacgggcttgcggctctgctgcctgtgccgctggtgtatcggcggcacgcacacgccgt
acggggcgcaatgtaaaagtcattgtgccgggcgggccattgcagatcgactggcgcgat
gatgatcatgttttaatgacgggaccggctgaatgggagttttcggggcagtttgatccg
gcaacaggtctttgggcaaaagacacaacagcggaaggtgcctga

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