Pseudochrobactrum sp. XF203: LDL70_15245
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Entry
LDL70_15245 CDS
T10521
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
psxf Pseudochrobactrum sp. XF203
Brite
Enzymes [BR:
psxf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDL70_15245 (addB)
DNA repair and recombination proteins [BR:
psxf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LDL70_15245 (addB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UCA45615
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Position
3323157..3326285
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AA seq
1042 aa
AA seq
DB search
MSERRPRLYSIASGTPFLPRFADALLNGELIEGFGADAGNPLALADAVIYVPTRRAARAL
RALLVDRNPANAALLPSIRPLGDVEESAALFDSAAEEFLQLAPPMSEPERLLLLAQLIRP
WRESLPSHIRAMFGAEDIAIPATTADAIWLARDLVRLMDQVETEGADWSELGLIAPEELA
DWWRVTLQFLEIVTKIWPDVLAERNRSNASQHRNWLIEFETQRMQKNPPQGPVIVAGSTG
SIPATAKLVATIARLPKGAVVFPGLDRDLDEKAWTLLADGLNNPSTYGHPQYGLRKLLDQ
MQCRREDVQHLEITNPAKRMREHIVSEALRPAETTDLWGHLKLDAQAVRDAMKNVALIET
ANEREEALAVALALRDAIEAPNKTAALVTVDRNLARRVVLELTRFGIDADDSGGKLLRDT
EAVILLRLLITCVFEPGDPVALLALAKHPLVRLGQKRGDLRRAAEMLELVALRGGTGRAD
IADLPGFLEQKMMEASAKPYEPAWQDNIAAAELIQLQSFCAAMTAAVAPLTDLIRIQARI
EVPQIMRASVEALENLARDIDDTVHLLYQGQQGEQFSAFLRQLIAADTGLDFLPEEWPDM
FEALLANETVKPHPGGHPRVFIWGALEARLQTVDTVIVGGLNEGIWPAKTRNDPFMSRPM
KGMIALDPPEVRTGLAAHDFAMATGMEQVIFSRSQRSENAPTVPSRWLLRLETVTGKAVT
DAMRERGGKYLHWARLLDVSPDVPFVSRPEPKPPVDARPKHFSVTEIETLRRDPYAIYAK
KILRLRALEPLIRDPAAAERGTLFHDILGEFTRRDIDPLSPQAEEELLEIGRGAFTDADL
PPEIEAVWWPRFTALIPEFLHWERERAPYVRERHAEISSAKAVVEPLAVTLSGRADRIDV
MRDGTTVVIDYKTGSTPSVRQAHVLLSPQLALEAALLRRGAFKEIGQSDAQDLLYVRLQG
GGRLKPESILSTDRGASVKTAVELGEESWTRLGELLTEYNREEQGYRSRALPFRESDLTG
DYDHLARVLEWSAGGADEGGDA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcggcgtccgcgtctttattcgattgcatcgggaacaccatttctgccgcgt
tttgccgatgctttgctgaatggcgagctgatcgaaggctttggcgctgatgcaggcaat
ccgctggctctggcagacgcggtgatctatgtgccgacacgccgtgcggcacgtgctttg
cgcgctttgctggttgaccggaatccggctaatgccgctcttttgccgtctatccgcccg
ctgggtgatgtggaggaaagtgcagcgctgtttgacagtgctgcggaagagtttctccag
cttgccccgccgatgagtgagccggaacgactattattgctcgcgcagctgatccgcccg
tggcgggaaagcctgccgtcgcatattcgtgccatgttcggtgcagaggatattgccatt
ccggcaaccactgctgatgctatctggctggcgcgtgatctggtgcggctgatggatcag
gtggagacagaaggggcagactggagcgagcttggtctgattgcaccggaagagcttgcc
gactggtggcgggtgacactgcaatttctggaaatcgtcaccaaaatctggccggatgtt
ttggctgaacgcaaccgttccaatgcttcgcagcaccgcaactggctgattgaatttgaa
acgcagcggatgcagaaaaatccgccgcaaggccctgtgattgtcgccggttccaccggc
tctattccggcaacagcaaagctggtagcaacgattgcccgcctgccaaagggcgccgtg
gtatttccggggctggatcgtgatctggatgagaaagcatggaccttgcttgccgacggg
ctgaataatccgtccacctatggtcatccgcaatatgggttgcgcaagcttctggatcag
atgcagtgtcgtcgtgaagatgtacagcatctggaaattacgaatccggctaagcgtatg
cgtgagcacattgtcagtgaggcattacgtccggcagaaaccaccgatttatgggggcat
ttaaagctcgatgcacaggctgtgcgcgatgcgatgaagaatgtggcactgatcgaaacc
gccaatgagcgtgaagaagcactggcagtggcactggctttgcgggatgcgattgaagcg
ccgaataaaaccgcagcgctggtgacggttgaccgtaatctggcgcggcgtgtggtgctg
gaacttacgcgtttcggcattgatgcggatgattccggcggtaaactcctgcgcgatacg
gaagcggttattctgctgcgcctgttgattacctgtgtatttgaaccgggtgatccggtg
gcgctgctggcactggccaagcatccgctggtgcggctgggacaaaagcgcggtgatctg
cgccgtgccgcggaaatgctggaacttgttgcgctgcgtggtggtacgggcagggcggat
attgctgatctgccgggctttcttgaacagaaaatgatggaagcctccgccaagccttat
gaaccggcctggcaggataatattgcggcggcagagctcatccagttgcagagtttctgt
gcagcaatgactgcggctgtggcaccgctgaccgatctcatccgcattcaggcacggatt
gaagtgccgcagattatgcgggcgagtgtcgaggcactggaaaatctggcgcgggatatc
gatgataccgtgcatctgctctatcaggggcagcagggcgagcagttcagtgcatttctg
cgccagttgattgccgccgacacagggttggattttctgccggaagaatggccggatatg
tttgaagcgctgctggccaatgaaacggttaagccgcatccgggcggtcatccgcgtgtg
tttatctggggtgcgctggaagcacgtcttcagacggttgatacggtgattgtcggaggg
ttgaatgagggcatctggccggcaaaaacccgcaatgatccgttcatgtcacgcccgatg
aaaggcatgatcgcgcttgatccgccggaagtgcgtaccggtttggctgcgcatgatttt
gcgatggcgacggggatggaacaggtgattttctcccgctcgcagcgctctgaaaatgca
ccgactgtgccgtcgcgctggttgctgcggctggaaacggtaacgggtaaagcggtaacg
gacgccatgcgtgagcgcggcggtaaatatctgcactgggcgcgtttactggatgtcagc
cccgatgtgccgtttgtctcgcgtccggaaccgaaaccaccggtggatgcgcgaccaaaa
catttctcggtgacagaaattgaaacactgcgccgcgatccttatgcgatctatgcgaag
aaaatcctgcgtctgcgtgcattggagccactgatccgtgatccggcagcggctgagcgc
ggaacattgtttcatgacattctcggcgaatttacccgccgcgacattgatcctctgtca
ccgcaggcagaagaagagttgctggaaatcgggcgcggtgctttcactgatgccgatctg
ccgccggagatcgaagccgtgtggtggccgcgttttactgcgctgataccggagttctta
cattgggaacgtgaacgtgcgccttatgtgcgtgagcgccatgcggagatttcatcggca
aaagcggttgtcgagccgctggctgtgacactgtccggacgtgctgaccgtattgatgta
atgcgcgacggcacgacggtagtgatcgactataagaccggctccacaccatcggtgcgt
caggcccatgtgcttttgtcgccgcagctggcgctggaggcggctctgttgcgccgtggt
gcgtttaaagagatcggccagagcgatgcacaggatttgctctatgtgcgcttgcagggc
ggcggaaggctcaagccggaatccattctcagtacggatcgcggcgccagcgtgaaaacc
gctgtggaattgggtgaagaatcgtggacgcgtctcggagaattgctgacggaatataat
cgcgaggagcagggctatcgttcccgtgctttgccgttccgtgaaagtgatctgacgggt
gattatgatcatctggcgcgggttctggagtggtcggcgggcggagcagacgaaggcgga
gatgcataa
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integrated database retrieval system
