Psychromonas sp. CNPT3: PCNPT3_00305
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Entry
PCNPT3_00305 CDS
T02515
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03420
Nucleotide excision repair
psy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCNPT3_00305
03430 Mismatch repair
PCNPT3_00305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_00305
Enzymes [BR:
psy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCNPT3_00305
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCNPT3_00305
MMR (mismatch excision repair)
Other MMR factors
PCNPT3_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AGH80003
LinkDB
All DBs
Position
complement(84765..86933)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSYLIDGLNDFQRAAVSCPQQNMLVLAGAGSGKTRVLTHRIAWLLEVEHIPTYGILAV
TFTNKAAKEMRARINAICPQQISGMWIGTFHGIAHRLLRLHFQEANLPEHFQIIDSDDQQ
KMIKRLIKVLNLDDKYYPAKELQWYINDKKDEGLRAKHIDAGYSMQEKQRLQVYKAYEEA
CQLSGLVDFSELLLRTHELLLTHPALLQHYQQRFKHVLVDEFQDTNKLQYAWLTLLTDAD
NFLTIVGDDDQSIYGWRGADIENIQRFLKEKENPITIRLEQNYRSTGHILNASNQLIKNN
SDRLGKELWTSGEDGDPIAIYNAFNEYDETRYVIAQIQKWERESNKLCDCAILYRSNAQS
RLFEEQLMANQIPYHIYGGQRFFDRLEVKDSIAYLRLMNNHNDDAAFERIVNKPKRKIGN
TTLDKIRLCAREQGYTLWHASCYLIEAKQLSAGAMRSLEAFIDLVSRFKGETSELPLFQL
MDHIINHSGLKEMFANEKGEKSRSRIENLEELVSASKSFTMPEEEQEMDELTAFLAYAAL
ESGDNQADEFTDAVQLMTMHSAKGLEFSQVFMVGVEEGMFPGQRSIEDPSRLAEERRLCY
VGMTRAKQKLTICHADSRRLYGQEKFHKPSRFIAELPDEDIAFIRMKTQVKRAQPNVEKS
YASAPTQDVLGFELGQQVKHAKFGEGTIIAQEGSGENSRLQVHFSDVGSKWLMTAYARLE
HV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcatacttaattgatggtttaaatgactttcaacgcgcagcggtttcttgc
ccacagcaaaacatgctcgtacttgccggtgctggcagtggtaaaacacgcgttttaacg
caccgtattgcttggttacttgaagttgagcatatccctacttacggtattttagcggtg
acttttactaacaaagcagctaaagaaatgcgcgctcgtatcaatgctatctgtccacaa
caaatatctggcatgtggattggcactttccatggtattgcacatcgcctgttacgctta
cattttcaagaagccaaccttcccgagcattttcaaattatcgacagcgatgatcaacaa
aaaatgatcaaacgtctgatcaaagtcctcaatttagatgataaatattacccggcaaaa
gaattacagtggtatatcaatgacaaaaaagatgaaggcttacgcgctaaacatattgat
gcaggctacagcatgcaagaaaagcaacgcttacaagtctacaaggcttatgaagaagcc
tgtcagttatctggtttagttgatttttctgagcttttattacgtactcatgaactttta
ttaactcaccccgctttgttgcaacactaccaacaacgttttaagcatgttttggtcgat
gagtttcaagataccaataaattacaatatgcttggctcactttactcactgatgcggat
aattttttaaccattgtgggtgatgatgatcaatctatttatggctggcgtggtgcagac
attgaaaatattcaacgtttcttaaaagaaaaagaaaatccgatcaccattcgcttagag
caaaactaccgctctaccgggcacattcttaatgcatctaaccaattaataaaaaataat
agtgaccgtttaggtaaagaattatggaccagtggtgaagatggcgatccgattgctatt
tataacgcctttaatgaatatgatgaaacgcgttatgtgatagcgcagatccaaaaatgg
gaaagggagagtaacaaactctgtgattgcgctattttataccgtagtaatgcacaatcg
cgactttttgaagagcaattaatggcaaatcaaattccttatcatatttatgggggacag
cgtttctttgatcgcctcgaagtaaaagacagtatcgcttatttacgcctgatgaataat
cataatgatgacgctgcatttgagcgcatcgtcaataagccaaaacgtaaaattggtaat
acaaccctcgataaaattcgcctctgtgcgcgcgagcaaggctatacactctggcatgct
agctgttatttaattgaagctaaacagctcagtgccggtgcaatgcgatcgttggaagca
tttattgacttagtgagtcgctttaaaggtgaaacctctgagttacctttgtttcaatta
atggatcatattatcaatcattctggcttaaaagagatgttcgccaacgaaaagggtgaa
aaatcacgaagccgtattgaaaatttagaagaacttgtctctgccagtaaaagttttacg
atgccagaagaagagcaagagatggatgagttaaccgcatttcttgcttatgcggcgctc
gaatccggtgataatcaagccgatgaatttaccgatgcagtgcaacttatgacgatgcac
tcggctaaaggcctggagttttcacaagtctttatggttggcgtagaagaagggatgttt
ccagggcaacgctccatagaagatccgtcgcgtttggcagaagagcgccgcctttgttac
gtgggtatgacgcgcgctaagcaaaaactgaccatttgccatgccgacagtcgccgttta
tatggacaagaaaaattccataagccatcgcgatttattgcagagttaccggatgaagat
attgcgtttattcgcatgaaaacacaagtgaagcgcgcccaacccaacgttgaaaaaagt
tatgccagtgcgcccactcaagatgttttaggctttgaactagggcaacaagtaaaacat
gcaaaatttggagaaggcaccattattgcgcaagaaggcagtggtgaaaatagccgctta
caagtacatttctcagatgtcggcagtaaatggttaatgaccgcttacgcaagacttgag
catgtttaa
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