Psychromonas sp. CNPT3: PCNPT3_01155
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Entry
PCNPT3_01155 CDS
T02515
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCNPT3_01155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psy03021
]
PCNPT3_01155
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_01155
Enzymes [BR:
psy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCNPT3_01155
Transcription machinery [BR:
psy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PCNPT3_01155
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PCNPT3_01155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4843
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AGH80173
UniProt:
M4U1A0
LinkDB
All DBs
Position
259895..260881
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AA seq
328 aa
AA seq
DB search
MQGSVIDFLKPRLVDIEQVNATRAKVTLEPLERGFGHTLGNALRRILLSSMPGAAVTEVE
IDGVQHEYSSKEGVQEDILEILLNLKGLAVKLEGKNEVLVSLTKSGAGPVTAGDIIHDGD
VEIVNPEHVICHLTGNAEISMRIKIESGRGYVPASTRIHSEEDERPIGRLLVDACFSPVE
RIAYSVESARVEQRTDLDKLIIDMETNGTIDPEEAIRRAATILAEQLDAFVDLREANVPV
EKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLIED
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaattgattttctaaaaccaagattagttgatatcgaacaagtcaac
gcaacaagagccaaagtgactttagagccacttgagcgtggtttcggccacactctaggt
aatgcacttcgccgtattttattatcgtctatgcctggtgcagcggtaactgaagtcgaa
attgatggtgtacaacatgagtacagcagcaaggaaggcgttcaagaagatatccttgag
attcttcttaaccttaaaggtcttgctgttaagcttgaaggtaaaaacgaagttctagtt
agcttaactaagtctggcgctggtcctgttactgcaggcgacatcatccatgatggtgat
gtagagatagtcaacccagaacatgtgatctgtcatttaacgggcaatgctgaaatcagc
atgcgtattaaaattgaatcaggtcgcggttacgttccggcttcaacacgtatccatagt
gaagaagatgagcgtccaatcggtcgtttactcgttgatgcatgtttcagtcctgttgag
cgtatcgcttacagtgttgagtctgctcgcgttgaacaacgtacggatttagacaaactt
atcatcgatatggaaacaaacggtacgatagatcctgaggaagcaattcgtcgcgcagct
acaattttagctgagcaattagacgcatttgttgacttacgtgaagctaatgtacctgtt
gagaaagaagagaaacctgagtttgatccaattctcttgcgcccagtagatgatttagag
ttaactgttcgttctgctaactgtttgaaagcagaaacgattcactatatcggtgatttg
gtacaacgtacagaagttgaacttcttaaaacgcctaatttaggcaagaagtcactaact
gaaatcaaagatgttcttgcatcacgtggactgtctctaggcatgcgcttagaaaactgg
ccacctgcaagcctaatcgaagattaa
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