Psychromonas sp. CNPT3: PCNPT3_01755
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Entry
PCNPT3_01755 CDS
T02515
Name
(GenBank) multifunctional 5'-3' exonuclease/3'-5' polymerase/3'-5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03030
DNA replication
psy03410
Base excision repair
psy03420
Nucleotide excision repair
psy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCNPT3_01755
03410 Base excision repair
PCNPT3_01755
03420 Nucleotide excision repair
PCNPT3_01755
03440 Homologous recombination
PCNPT3_01755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psy03032
]
PCNPT3_01755
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_01755
Enzymes [BR:
psy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCNPT3_01755
DNA replication proteins [BR:
psy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PCNPT3_01755
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PCNPT3_01755
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCNPT3_01755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGH80293
UniProt:
M4U1M4
LinkDB
All DBs
Position
414635..417445
Genome browser
AA seq
936 aa
AA seq
DB search
MATIPENPFVLVDGSSYLYRAFFSPPHLTNSAGDATGAVYGVVNMLKSLMQQFSPSHIVV
VFDAKGKTFRDDMYSQYKANRPSMPDDLRIQIEPLHAVIKAMGLPILIVPGVEADDVIGT
LSKQASAKGIKTLISTGDKDMAQLVDEHTLLINTMTNSVLDIDGVTEKFGVPAELIIDYL
ALMGDTADNIPGVPGVGSKTALAMLQGIGSMDLIYENLDKLAPLGFRGSKTIAKKMADNE
DMARLSYKLATIKLDVELEVAYDDFKTIKQDTDSLIKLFGKLEFRRWLSAVLDGEQILQG
GASTSMTSTPSTSDTELSLEIKKTPIRHDQCIYTQGQLKQLIQKLEKAELFSISIETTCA
DYMQAKIVGFSFALQVADENSAEITIEAFYLPLAHDYIDAPAQLEYLATLDKLKPLLEKI
APQKVVFNLKFMRSVLRLEGINLQGVAFDPMLESYLLDSTGKHDKASLTLKYLQIEIASY
EAIAGKGKKQLPFNQVSIKDITPYVGEHVELSLRLHLLLWPKLEKFPKLVALYEDIELPL
AIVLSDVELGGVEIDATMLGAQSVEIGKRLLEIEKEAYIEAGKEFNLSSPKQLQSILFED
LELPILKKTPKGAPSTGEEVLVELAETYKLPKLVIEHRGLSKLKSTYTDKLPKMINAQTG
RVHTSYHQAVTVTGRLSSSDPNLQNIPIRSEQGRRIRQAFIAPQGYKIVAADYSQIELRI
MAHLSQDKGLLEAFSTGLDIHKATASEVFSVSVDEVTTNQRRSAKAINFGLIYGMSAFGL
AKQLKISRSDAKLYMDKYFHRYPGVLTYMQTTRDKAREQGFVETILGRRLQLPHINSRNG
ILKKASERAAINAPMQGTAADIIKKAMLDVAAWVEKQAPSQVQLLMQVHDELVFCIKEDQ
VENYTCIIQEIMAKAVILDVPLLAEVGVGNNWDEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgactattcctgaaaatccttttgtacttgttgatggctcttcgtatctttatcgt
gcctttttctctcctcctcacttaaccaattctgcaggcgacgcgacgggcgctgtttat
ggtgtggttaatatgctcaaaagcttaatgcagcagttttctccttcacatattgtggtc
gtctttgatgccaagggtaaaacgtttcgtgatgatatgtactcacaatataaagcaaac
cgcccgagtatgcccgatgacctgcgcattcaaattgaaccgttacatgcagtgatcaaa
gcaatgggtttacctattttaattgtccctggggttgaagcggatgatgtgatcggcacc
ttgtcgaaacaggccagtgcgaaaggcattaaaacattgatcagtacgggcgataaagat
atggctcagttagtcgatgagcatacgttacttatcaatacgatgaccaacagtgtactt
gacatagacggcgtcactgagaaatttggtgtgccagctgagcttattattgattattta
gctttgatgggtgataccgcagataatattcctggcgtccctggcgtgggctctaaaacg
gcattagccatgctacaaggtattggtagcatggatcttatctatgaaaaccttgataaa
ttagcgccattaggattccgtggcagtaaaacgattgctaaaaaaatggctgataatgaa
gacatggcgcgtttgtcatataaattagcgaccatcaaactcgatgttgaattagaggtt
gcctatgatgatttcaaaacgataaaacaagacacagatagcttaattaaactctttggt
aaattagaatttagacgctggttatctgctgtcctcgacggtgagcaaatattacaaggt
ggcgcgtcgacatcgatgacaagcacgccaagtacctctgatactgagttgagtcttgaa
atcaaaaaaacgcctattcgccatgaccagtgtatttatacgcaagggcaattgaagcaa
ttaattcaaaaattagaaaaagccgaattattttcaatatcgatagaaacaacctgtgct
gattatatgcaggctaaaattgttggattttcttttgctctgcaagtggcagacgaaaac
agtgcagagataacgattgaagctttctatttaccactcgcgcatgattatatagatgca
cctgcgcagttagagtaccttgctacccttgataaattgaagcccttattagaaaaaata
gcaccacaaaaagtggttttcaatttaaaatttatgcgcagcgtactccgtcttgaaggt
attaacttgcaaggcgtcgcatttgatccgatgcttgaatcttacctattagacagtaca
ggcaaacatgataaggcctctctcacgttaaaatatttacagattgagatagcctcttat
gaagcaatcgcaggtaaaggcaaaaaacagctgccattcaatcaagtgagtattaaagac
attacgccttatgtaggtgagcatgttgaattgagcttacgtttgcatttactgttgtgg
cctaaattagaaaaatttccgaaattagtggcgttatacgaagatattgaattgccttta
gctatcgtactttccgatgttgagctaggaggcgtcgaaatagatgccactatgctgggc
gcacaaagcgtcgaaattggtaaaaggttactcgaaatagagaaagaagcttatatcgaa
gcgggtaaagagtttaatttaagctctccaaaacaattacaaagcattctatttgaagat
ttagaattacctattctgaagaaaacgcctaaaggcgcaccttcaacaggagaggaagta
ctcgttgagttagctgagacctataagttgcctaagttagtgattgagcatcgaggtttg
agtaaactaaaatcgacgtataccgataaactaccaaaaatgatcaatgcacaaacgggc
cgagtacatacttcttatcatcaagcggtaactgtgacggggcgtttatcatcaagcgat
ccaaatttacagaatataccgatccgaagtgaacaaggtcgacgtattcgccaagctttt
attgcgccgcaaggctataaaatagtagcagccgattatagccaaatcgaattacgtatt
atggcgcatttgtctcaagataaaggcttattagaagccttttcaaccggccttgatatc
cataaagcgacggcgtcagaagttttctctgtctctgtcgatgaggtgacaacaaatcaa
cgacgcagtgctaaagccataaattttggccttatttatggaatgagcgcctttggtttg
gcaaagcagttaaaaatatcacgatccgatgcaaagctgtatatggataaatattttcat
cgttatccgggcgttttaacgtatatgcaaaccacccgagataaagcgcgcgagcaaggc
tttgttgaaacaattttagggcgtcgtttacaattaccgcatattaattcgcgtaatggt
attttaaagaaagcgtctgagcgcgctgcaattaatgcaccgatgcaaggcactgctgct
gatattattaaaaaggcgatgctagatgttgctgcttgggttgaaaaacaagcgccttca
caagtgcagttactcatgcaagtgcacgatgaactggttttctgtattaaagaagatcag
gtcgaaaattatacgtgcattattcaggaaataatggcaaaagccgtcatcttagatgtg
ccattacttgcggaagttggagtgggtaataactgggatgaagcacattaa
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