Psychromonas sp. CNPT3: PCNPT3_02820
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Entry
PCNPT3_02820 CDS
T02515
Name
(GenBank) RNA polymerase sigma-32 factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psy03021
]
PCNPT3_02820
Transcription machinery [BR:
psy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCNPT3_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LysM3_NFP
UCR_14kD
HTH_25
Glyco_hydro_97
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AGH80506
UniProt:
M4U4H9
LinkDB
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Position
671789..672637
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AA seq
282 aa
AA seq
DB search
MIKKIDSMGLVPQGSIEAYIQSVNKFAMLSASEEKALAERLFYEGDLDAAKKLVMSHLRF
VAYIAKSYAGYGLAIADLIQEGNVGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEYVIRN
WRVVKIATTKAQRKLFFNLRKAKKRLGWFSKDEVENVANNLNVSTKDVLEMESRLNGHDY
SFDLTGDDDDENCFAPVQYLEDKNADVALLVEVENSQSNMKRQLHSALSSLDERSQDIIS
SRWLNEPKATLHDLAARYSISAERVRQLEANAIKKLQSNMQF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaaatcgattcaatgggcttggttcctcaagggagcatcgaagcttatatt
cagtcggtaaataaatttgcaatgctttctgcctcagaagaaaaagcattagcagaacgt
ttattttatgaaggtgatttagacgcagctaaaaaattggttatgtctcatttacgtttt
gttgcttatattgcaaaaagctatgcaggttatggtttagctatcgcggatcttatccaa
gaaggtaatgtgggtttaatgaaagcggtcaaacgtttcgaccccactgttggtgtacgt
cttgtgtcttttgctgtgcattggatcaaagctgaaattcatgaatatgttattcgcaat
tggcgcgttgttaaaattgcgacgaccaaagcacaacgtaaattgttttttaatttacgt
aaagctaaaaaacgtttaggttggtttagcaaagatgaagtggaaaatgttgctaacaat
ttgaatgtgagcacaaaagatgtgctggaaatggaatcacgtttaaacgggcacgattat
tcgtttgatttaacaggtgatgacgatgatgaaaattgttttgcaccggtacaatattta
gaagataaaaatgcagatgtagcattactggttgaagttgaaaattctcagtctaatatg
aagcgtcaattacattcggcactatcctcattagatgagcgaagccaagatattattagt
agccggtggttaaatgagcctaaagcgacgttgcatgacttagctgcgcgttacagtatt
tctgctgagcgagtcaggcaacttgaagccaatgccattaaaaaattacagtccaatatg
caattttaa
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