Psychromonas sp. CNPT3: PCNPT3_03330
Help
Entry
PCNPT3_03330 CDS
T02515
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psy03032
]
PCNPT3_03330
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_03330
Enzymes [BR:
psy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PCNPT3_03330
DNA replication proteins [BR:
psy03032
]
Prokaryotic type
DNA Topoisomerases
PCNPT3_03330
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCNPT3_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
AGH80608
LinkDB
All DBs
Position
794041..796761
Genome browser
AA seq
906 aa
AA seq
DB search
MSEFAPDVSPINIEDELKNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLRNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLIDGQGNFGSVDGDSAAAM
RYTEIRMDKIAHELLADLDKETVDFVPNYDGTELIPEVMPTKIPNLLINGSSGIAVGMAT
NIPPHNLGEVIDGCLALINNPDLTIDQLIEYIPGPDFPTAGIINGRKGIIDGYKTGRGKL
KIRAKARVEVNEKTGRETIIVDELPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRMVIEVKRGEVGEVILNNLYAQTQMQSSFGINMVALDHGQPKLLNLKEMLHAFILHRRE
VVTRRTVFELKKARARAHLLEGLAISLANIEPIIELIRHSSTPAEAKTALQAQGWKLGNV
AAMLEASGVDVARPDGLAIEFGMRDDLYFMTDTQAQAILDMRLHKLTGLEHEKILNEYKE
LIEIITALLFILENPHRLMEVITEELNDVRANFADARRTEITASETDLCMEDLITEEDVV
VTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKDEDFIDKLLVASTHDTILCFSTRGRLY
WLKVFQLPLASRQARGRPIINILPLEQGERITAILPVRTYDDDKFVFMATANGTVKKTAL
SAYSRPRASGLIAINLNDDNELIGALITNGENEIMIFSDAGKVVRFKEAEETLVVDEQGN
PVLDENGVQEIKFKGVRPMGRTATGVRGIKLKEGEKAVSLIVPNATGHILTCTENGYGKR
TPLSDYASKSRATQGVISIKVSERNGKVVGAVQVDENDEIMLISNRGTLVRTPVHGVSIV
GRNTQGVTLIRTRDDEKIVALQRIEEVHELPVYEDDETTQNIPVEQKEGAELDPEITESN
DETLSE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatttgcacccgatgtatctccaattaacattgaagatgaattaaagaactct
tatcttgaatatgcaatgagcgttattgttgggcgtgctttgcctgatgtacgtgatggc
cttaagcctgtgcatcgtcgcgttttgtttgcgatgaacgtattacgtaatgattggaat
aaaccttataaaaaatcagcacgtgttgttggtgatgttatcggtaaataccatccacat
ggtgatactgcggtctacgatacaatcgtacgtatggcacaagatttctcattacgttac
atgttgattgacggacaaggtaacttcggatctgtagatggggatagcgcggctgcaatg
cgttataccgaaattcgtatggataagatcgcgcatgaattattggccgatttagataaa
gaaacggttgattttgtacccaactatgatggtactgagcttattcctgaagtaatgcca
acaaaaatacctaacctacttattaatggttcatcaggtattgcggttggtatggcaacc
aatatcccaccacataatttaggtgaagtgattgatggttgcttagcgttaattaataat
cctgatcttactattgatcaattaattgaatatatccccggtccagattttccaaccgcg
ggcattataaatggccgtaaaggcattattgacggttataaaaccggtcgtggaaaatta
aaaatccgcgctaaagcccgcgttgaagtcaatgaaaaaacaggtcgtgaaacgatcatt
gttgatgaactaccttaccaagttaataaagcacgcttaattgaaaaaattgctgaatta
gttaaagataaaaaaatagaaggtatcagtgcactgcgtgatgagtcagataaagacggc
atgcgtatggtgattgaagtgaaacgtggtgaagtgggggaggttattttaaataacctt
tatgcacaaacacaaatgcaatcgtcatttggtatcaatatggtagccctggatcacggc
caacctaaattattgaacctaaaagaaatgttacatgcatttatcttgcatcgccgtgaa
gtggtaacacgtcgcaccgtgtttgaattgaaaaaagcacgagcccgtgcgcatttatta
gaaggtttggcgatttcattggcgaacattgagcctatcattgagcttattcgtcattca
tcaacgcctgctgaagcaaaaactgcattacaagcacaaggctggaaactcggtaatgtc
gcagcgatgttagaagcgtcaggtgttgatgttgcgcgcccagatggacttgcgattgaa
tttggtatgcgtgatgatttgtacttcatgacagacacacaagcccaagccattttggat
atgcgtttgcataaattaacgggtcttgagcatgaaaaaatattaaatgaatacaaagaa
ttaattgaaattatcactgctctgttatttattttagaaaaccctcatcgtctaatggaa
gtgatcactgaagaattaaacgatgttcgtgctaattttgcagatgctcgtcgtactgaa
atcaccgcgtctgagacagatctttgtatggaagacttgatcactgaagaagatgttgtc
gtgacgctatcgcatgaaggttatgtgaagtaccaaccactcaccgactatgaagcgcag
cgtcgtggtggtaaaggtaaatcagcaacgaaaatgaaagacgaagactttattgataag
ttattagtggcaagtacacacgatactatcttgtgtttctctacgcgtggacgtttatac
tggttaaaagtattccaattgcctttagcatctcgtcaagcacgtggtcgtccgattatt
aatatcttaccgttagagcaaggcgaacgtatcaccgctattttaccggttcgtacctat
gatgatgataaatttgtatttatggcaacggccaatggtacggttaagaaaacagcatta
agtgcttatagtcgtcctcgtgcaagtggtctgattgctatcaacttaaatgatgataat
gaactgattggcgcattgataaccaatggtgagaatgagatcatgatattctcagatgcg
ggtaaagttgtacgctttaaagaagcagaagaaactttagttgtcgatgagcaaggtaac
cctgtactcgatgaaaatggcgtacaagagatcaagtttaaaggggttcgtccaatggga
cgtactgcgacgggtgtacgtggtatcaaacttaaagaaggcgaaaaagcggtttcttta
attgtaccgaatgcaacggggcacatcttaacctgtactgaaaatggttatggtaaacgt
actccattgagcgattatgcatcgaagagtcgtgcgacgcagggcgttatctcgattaaa
gtgagtgagcgtaatggtaaagttgttggcgcagtacaagttgatgaaaacgatgagatc
atgttgatttcaaatcgtggaacgttagtgcgtactccggtacatggtgtctcaattgtg
ggacgtaatacccaaggcgtgacgcttatccgtacgcgtgatgatgaaaaaatagtggcg
ctacaacgcattgaagaggtacatgagttacctgtttatgaggatgatgaaacaacacaa
aacatcccagttgagcagaaagagggagccgagctggatcccgaaataacagaaagcaac
gatgagacgctttctgaataa
DBGET
integrated database retrieval system
