Psychromonas sp. CNPT3: PCNPT3_04045
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Entry
PCNPT3_04045 CDS
T02515
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCNPT3_04045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_04045
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCNPT3_04045
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PCNPT3_04045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
AGH80751
LinkDB
All DBs
Position
961769..963778
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AA seq
669 aa
AA seq
DB search
MQKKFELHAKFSPAGDQPQAIESLVAGIEDGVAFQTLLGVTGSGKTFTLANTIAQLNRPT
LILAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPSTDSFIEKDAAINAHIE
QMRLSATKALLERTDVVLVASVSAIYGLGDPKAYLKMMLHLSVGEFISSREILQRLVDLQ
YSRNDTELSRGTFRVRGEIIDIFPADSEIEALRIELFDDEVENISVFDPLTGQTLDKLAR
VTIYPKTHYVTPREQIIKAIKSIKEELVERKKSFLSNNKLIEEQRISERTLFDIEMMTEL
GYCSGIENYSRYLSGRDQGAAPPTLFDYFPAKSLLIIDESHVTIPQIGAMYKGDRSRKEN
LVNYGFRLPSALDNRPLKFSEFEKLAAQTIYVSATPADYEIEKSKGDIVRQVIRPTGLLD
PLIEVRDVHTQVDDLLSEINLRVPLKERVLVTTLTKRMAEDLTDYLTEHGVKVRYLHSDV
DTVERIEIIRDLRLGIFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTMG
RAARHLKGKAILYAAKVTKSMQKAIHITTQRRELQHQYNIDNNIVPQGLNKAVDDILQLG
KRSPKKSRKGTSELWKKEATPVANEKTLLKQMVRLEKQMFVHAKDLEFEKAAQLRDEISE
LQAQLILIS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaattcgaattacatgctaaattctcaccggctggcgatcagccccaagct
atcgagtctttggtggcaggtattgaagatggggtggcttttcaaacgttattaggtgtt
accggctccggtaaaacgtttacgcttgctaataccattgcgcagttaaatcgtccgacc
ttaattttggcgcccaataaaacattagcagcccagctttatggtgaaatgaaagctttt
ttccctaataatgccgttgaatactttgtgtcttattatgattattatcagccagaggca
tatgtaccgagcacagactcctttatagaaaaagatgctgccattaatgcacatattgag
caaatgcgtctgtctgcaaccaaagccttattagagcgtactgatgtggtgttagttgcc
tctgtttccgcaatttatggtcttggcgatcccaaagcttatttaaaaatgatgttacat
ttaagtgtgggggaatttatttcgagtcgtgaaattttacagcgtttagtggacttgcaa
tattcgagaaatgacacggaattaagtcgaggtacttttagagtccgcggtgagatcatt
gatattttccctgctgattcagaaatagaagcgttacgtattgaactgtttgatgatgaa
gttgaaaacatcagtgtgtttgatcccttaaccggacaaacgttagataagctcgcacgg
gtaaccatttatcctaaaacgcattacgttacccctagagagcaaattataaaagcgatt
aagagtataaaagaggaactcgttgagcgtaaaaaaagttttttaagcaataataaatta
attgaagagcaacgtatctctgagcgcaccttatttgatattgaaatgatgaccgagctg
ggttattgctcgggtattgaaaattattctcgttacctttctgggcgagatcagggcgca
gcaccaccgacgctttttgattatttccctgcgaaaagtttgcttattattgatgaaagc
cacgtgaccatccctcaaattggcgcgatgtataaaggcgatcgcagtcgcaaagaaaac
ctagtgaattatggtttccgtttaccatctgcgctggataatcgaccgttaaaatttagt
gaatttgaaaagttggcggcgcaaacaatttatgtgtcggccacgcctgctgattatgaa
attgaaaaatcaaagggggatattgtgcgccaagttatccgcccaacagggcttttagat
cccttgattgaggtgcgtgacgtacatacgcaagtcgatgacttattatctgaaattaat
ttacgcgtgcctttaaaagagcgtgttttagtgacaacgctgactaaacgaatggcagag
gatttaacggattacttaacagagcatggcgtaaaagtgcgttatttacattcggatgtg
gatacggttgagcgcattgaaattattcgcgatctaaggttaggcatttttgatgtttta
atcggtattaatttactgcgtgaaggcttagatattcctgaagtctcattagtggcaata
ttggacgccgataaagaaggttttttacgatcggagcgctctttaattcaaacaatggga
agggctgcccgccatcttaaaggcaaggcgatattatatgcagctaaagtcactaaatcg
atgcaaaaggcaatacatatcacgacgcagcgccgagaattacagcatcaatataatatt
gataataatattgtgccacaaggattaaataaagcggttgatgatatattgcaattggga
aaacgtagccctaaaaagtcgcgaaagggaacatctgaactgtggaaaaaagaagcaacg
ccagtggctaacgagaaaacgttgctaaaacaaatggtacgtttagaaaaacagatgttt
gtgcacgcaaaagatttggagtttgaaaaagccgcgcaactgcgcgatgaaattagtgaa
ttacaggcgcaattaattttaatctcttaa
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