Psychromonas sp. CNPT3: PCNPT3_05780
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Entry
PCNPT3_05780 CDS
T02515
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_05780
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PCNPT3_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
AAA_22
DnaB_C
RecA_N
PAXNEB
AAA_16
Rad51
AAA_19
Lon_C
nSTAND3
AAA
GvpD_P-loop
nSTAND_NTPase5
ABC_tran
SLFN-g3_helicase
NACHT
AAA_30
MCM
AAA_24
NTPase_1
T2SSE
AAA_14
SRP54
Zeta_toxin
E217_GP41
KTI12
KAP_NTPase
NPHP3_N
TIP49
AAA_29
GvpD_bR2
AAA_18
AAA_5
Viral_helicase1
TsaE
NB-ARC
cobW
AAA_11
Zn_ribbon_8
ATP_bind_1
AAA_8
Mg_chelatase
Thymidylate_kin
AAA_28
AAA_17
RuvB_N
NAT10_TcmA_helicase
MobB
RNA_helicase
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AGH81098
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Position
complement(1359330..1360748)
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AA seq
472 aa
AA seq
DB search
MAKAKIKIAYVCSDCGADFTKWQGQCSECKAWNTITEFREAAVSSTSRSLNAAISRTKNT
SYTGINSQGVQRMDSVKIEQAARVSTGLSELDRVLGGGITLGSVVLISGDPGSGKTTLLT
KVAQIMSQTMVTLYVTAEESLSQWAKRATERLKLNFNELNFLLSDTDCIEDIVNQCLDNN
VRFLIADSIQAFESNSVDGTAGGITQVKTCAKILNRLCKQHGITLILVGQVNKNSQMAGP
QTLKHIIDTAIHIEVNDASVRILRADKNRFGDTEQVGIFQMTEFGMHSVDNPSRLFLSGS
EEHFEGSAIAVIKDGSRNLLIEIQALATDVEGEKSIRNCIGVSYSRLSLITAVLKKHGGI
STYYDINISLVGGLKMADSETSTDMAVTAALLSSINSKPLPEDAVFIGELALTGELRQIP
QIVPRVREALSHGIKHIFIPAVAYHKSMQQYVKAGQSIHPLKDIKALIEALN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaaaaattaaaatcgcatatgtctgcagtgactgtggcgcagactttaca
aaatggcagggacagtgcagtgagtgtaaggcgtggaataccataacagaatttagagaa
gctgcggtatcgagcacctctcgctcacttaatgctgccatttcacgtacaaaaaacacg
agctataccggtatcaatagccaaggtgtacagcgtatggacagtgttaaaattgaacag
gctgctcgcgtcagtaccggtttgagtgaattagatcgcgtcttaggtggaggcatcaca
ttggggtcggtcgttttgatcagtggcgatcccggctctggtaaaacaaccttgctgact
aaagtcgcccaaattatgtcacaaacgatggtaaccctttatgtcaccgccgaagaaagc
ttaagtcagtgggcaaaacgtgcaacagagcgtttaaaattaaattttaatgagcttaat
tttctcctttcagataccgattgtattgaagatattgtcaatcaatgccttgataacaat
gtgcgatttttaattgccgattctatccaagcctttgaatcaaacagcgttgacggcacc
gccggcgggataacacaagtaaaaacctgcgctaaaatattaaaccgtttatgtaagcaa
cacgggatcaccctaatattagtaggccaagtgaataaaaactctcaaatggcaggacca
caaacactaaaacatatcattgataccgcaatccatattgaagttaatgatgcctccgtg
cgtattttacgcgcagacaaaaatcgttttggtgacaccgagcaagtcggtatttttcaa
atgaccgaatttgggatgcattctgttgataatccgagtcgcctttttctttccggcagt
gaagagcattttgaaggctctgccattgccgttatcaaagatggctcacgtaatctgctc
attgaaattcaagcgctggcaacggatgtagaaggagagaagtccattcgtaactgtatc
ggggtttcctatagtcgtttgtcattgatcaccgccgttcttaagaaacatggtggtatt
tctacctactatgatattaacattagcttggttggcggactaaaaatggcggactctgaa
acatcgaccgatatggcagtaacagcagccctactcagttctatcaactcaaaaccactt
cccgaagatgctgtgtttattggagagcttgccttgacgggggaattacgccagatccca
caaattgttccgcgcgtcagagaagcgctcagtcatggtattaaacatatctttattccc
gctgtcgcctaccacaagtcgatgcaacaatatgttaaagcaggccaatctattcaccct
ctaaaagatattaaagcattaatagaggctttaaattaa
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