Psychromonas sp. CNPT3: PCNPT3_05895
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Entry
PCNPT3_05895 CDS
T02515
Name
(GenBank) type IV pilus assembly FimV-related transmembrane protein
Organism
psy
Psychromonas sp. CNPT3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AGH81121
UniProt:
M4U669
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Position
1387302..1393211
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AA seq
1969 aa
AA seq
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MKRFLLSIIFCSPLLLSAPSSFSITLIGPNGERPLSTEQYGPISNVETLWAVASKLRPNK
SVSVLQTLAAIYKLNPNAFADGNINQILPQSIIMIPSLEMISAQTNREASRLLNKYSVKR
SSPTVIKKSIAPIVVIKEEKIKIVKNTLPIQAPIKPQIQPLPIKKEIVKPLVQNTAKSAE
ALALIESLQTELEIINEEFLLSEEANQRLKLKLQPMYDQMNTLIEQIETDKILVQEKQDK
INDLEEQLAAKVESAFSGDGILNEILRFITSSLAHLLMVIISPVLLLLAGLVLMMRLRNK
KELAQEEQELAESTATLMETSEGLFDELLTDDDDDAEDNIELDFTKDAKINEDNSTEENN
KDVALSDSSETDVDVVDLSADDEVEEPKQETSEVKVEEDLIDEIDFDGSEVETSEDDPFG
IGALVDLEEEEPISAADQANLDLAAEWEAQISEDPAPTDSLIDDIFGDDVKKSEGSELGN
SALKEADESLEQTAATKKDAEKPVELNEDVDADTSDDLILSEDASELRLTDSEQDAISSE
AQDLATLEALTNDLGFEEFAEPKQLSADETVDSKTLESEDIVTESVLADPLDIEALAGKD
KTKDLSLEALAASDEVSAEEPVTTSTEEETNELSLEELVSSEEVESEVSAEEPVTTETEE
DTSELSLDELVSSEEVDVDMPASNEAQDMAELEALTNALSSDDVESESDLSLEELVASEE
VEPEVSAEEPVTTETEEDTSELSLDELVSSEEVDVDMPASNDAQDMAELEALTNALSSDD
IESESDLSLEELVASEEVEPEISIEEPVTTSTEEQATEVEEDTSELSLEELVASDEVEPE
ISIEEPVTTATEEETRELSLEELVATDEVEVSAEEPVTTDTEEQSTATEDETGDLSLEEL
VTSEEVEAEVSAEEPVTTATEEETSELSLEELVASEEVEPEISIEEPVITETEEQATATE
DETGELSLEELVATDEVEVSAEEPVTTDTEDETSELSLEELVATDEVEPEISIEEPVITE
TEEQATATEDETGELSLEELVATDEVEVSAEEPVTTDTEEQAPEIEKDTSELSLEELVVS
DEVDVESESDLSLEEVVASDEVEVSAEEPVTTDTEEEKTAVEEDTSELSLEELVASDEVE
PEISIEEPVTTDTEEDTSELSLEELVASDEVEVSAEEPVTTETEDETSELSLEELVATDE
VEVSAEEPVITDTEERATATEEDTSELSLEELVSSDEVEPEISIEEPVTTSTEEQATEVE
EDTSELSLEELVATDEVESEISIEEPVTTATEEETSELSLEELVASDEVEPEISIEEPVT
TETEDETSELSLEELVATDEVEPEISIEEPVITDTEEQATATEDETGELSLEELVASDEV
EVSAEEPVTTDTEDETSELSLEELVATDEVEPEISIEEPVITETEEQATTTEDETGELSL
EELVASDEVEADISIEEPVTTEIEEQATATEEVDVESESDLSLEEVVASDEVEVSAEEPV
TTDTEEETTAVEEDTSELGLEELVASDEVEAEISIEEPVTTSTEEQATAVEEDTSELGLE
ELVASDEVEAEISIEEPVTTSTEEQATATEEDTSELSLEELVASDEVEPEISIEEPVTTE
TEDETSELSLEELVASDEVDVDMPASNDAQDMAELEALTNALSDDVESVSDLSLDELVAL
EEVGAEVFSEESITAETEEETNELSLEELVALEDVEAEVFSEESITPEAKKETNELSLEK
LAVTEKELRIEELAMSDAQDLATLEALTNELSLEEFSETSVTTDKETNELSLEEIVEPPL
RAATVETHAQEKSIKELTEELFGLDTVVATDMQEAVDESLNDNNLLAEQLSKNAFKENTS
LPKVEPIGDKNNFIDIETLLEDSNKKSSEEPYTELDLDFSLDGFPDVVNSDTGVDVDNDD
NGLDAQLDLARAYLEIDDKAGAKKILLSLQECSDKKKKKEIAKLLSLLT
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctttcttctttcgattattttttgctctcctttattattatcggcgccttcc
agtttctcgattactttaattggcccaaatggagaacgacctctttctacagagcaatat
gggcctatcagtaatgtagaaacactttgggcggtagcatctaaattgcgccccaataaa
agtgtgagtgtattgcaaactttagctgcaatttataagctaaatccgaatgcatttgct
gacggcaatattaatcaaattctgccacagtcaattattatgatcccaagtttggagatg
atatcagcacaaacaaatcgtgaagcgtctcgcctacttaataaatacagtgtaaaaaga
tcgtcacctaccgtgatcaaaaaaagtattgctccaattgttgttatcaaagaagaaaaa
ataaaaatagtaaaaaatacattaccaattcaagcacccataaagcctcaaattcagccg
ttacctattaaaaaagaaatcgtaaaaccactcgtacaaaatactgctaaatcagctgaa
gcattagctcttattgaaagtttacagacagaattagaaataattaatgaagaatttttg
ttaagtgaagaagcaaatcaaagacttaagttaaaattgcaaccgatgtatgatcaaatg
aacactttgattgagcagatagaaacagataaaatacttgtacaagaaaaacaagataaa
attaatgatttagaagaacaactcgccgcaaaagttgaatctgcttttagtggtgatggt
atattaaatgagatattacgttttataacatcatcattagcacacttactcatggtgatc
atctcccccgttttattattgctcgcaggtctcgttttaatgatgcgtttgcgtaataag
aaagagttagcccaagaagagcaagaattagcagaatccactgcgacattaatggagaca
tctgaaggattatttgatgaattattgaccgacgatgatgatgatgccgaagacaatatt
gaacttgattttacaaaggatgcaaaaataaatgaggacaatagcacagaagaaaataac
aaagatgttgcattgtcggatagtagcgaaacagacgttgatgtcgtagatttaagtgct
gatgatgaggttgaagagccgaagcaagaaacgagtgaagtaaaagtcgaagaagatttg
attgatgaaattgattttgatggaagtgaagtagaaacctcagaagatgatccgtttggg
attggagctctggtcgatttagaagaagaagagcccatttcagctgcagatcaagcaaac
ttggatctggctgctgaatgggaagctcaaatatcagaagatccggctccaacagattca
cttatcgatgacatctttggtgatgatgtaaaaaagtctgaaggtagtgaacttggaaat
tcagcgttaaaggaagctgatgagtcacttgagcaaactgccgccactaaaaaagatgct
gaaaaacctgttgaactgaatgaagatgtcgatgctgatacaagtgacgatttgatctta
tctgaagatgcaagcgaattaaggcttactgatagcgagcaagacgcaatatcctccgaa
gcgcaagacttggcaactttagaggctctgactaatgatttaggttttgaagagtttgca
gaaccgaagcaattaagtgcagatgaaacggtcgattcaaaaacacttgaatctgaagat
attgtcacagagtctgtgctagctgatccccttgatattgaagcccttgctgggaaagac
aaaacaaaggatctcagtttagaagcgttagcagcatcagacgaagtttcggctgaagag
ccagttacaacttcaacagaagaagaaacaaatgagctgagtttagaagagttagtttca
tcagaagaagttgaatctgaggtttctgcggaagagcccgttacaactgaaacagaagaa
gacacaagtgagctcagtttagatgagttagtttcatcagaagaagttgatgtcgacatg
cctgcttctaatgaagcgcaagatatggcagaacttgaagccttaaccaatgcattaagc
agtgatgatgttgagtcggaaagtgatctcagtttagaagagttagttgcatcagaagaa
gttgaacctgaggtttctgctgaagagcccgttacaactgaaacagaagaagacacaagt
gagctcagtttagatgagttagtttcatcagaagaagttgatgtcgacatgcctgcttct
aatgacgcgcaagatatggcagaacttgaagccttaaccaatgcattaagcagtgatgat
attgagtcggaaagtgatctcagtttagaagagttagttgcatcagaagaagttgaacct
gagatctctattgaagagccagttacaacttcaacagaagaacaggcaactgaagtagaa
gaagacacaagtgagctcagtttagaagagttagtagcatcggatgaagttgaacctgag
atctctattgaagagccagttacaactgcaacagaagaagaaacaagagaactcagttta
gaagagttagttgcaacagacgaagttgaagtttcggctgaagagccagttacaacggac
acagaagaacagtcaactgcaacagaagatgaaacaggtgatcttagtttagaagagtta
gttacatcagaagaagttgaagctgaggtttctgctgaagagccagttacaactgcaaca
gaagaagaaacaagtgaacttagtttagaagagttagttgcatccgaagaagttgaacct
gagatctctattgaagagccagttataactgaaacagaagaacaggcaactgcaacagaa
gatgaaacaggtgagcttagtttagaagagttagtagcaacagacgaagttgaagtttcg
gctgaagagccagttacaacagatacagaagatgaaacaagtgaacttagtttagaagag
ctagttgcaaccgacgaagttgaacctgagatctctattgaagagccagttataactgaa
acagaagaacaggcaactgcaacagaagatgaaacaggtgagcttagtttagaagagtta
gtagcaacagacgaagttgaagtttcggctgaagagccagttacaacagatacagaagaa
caggcacctgaaatagaaaaagacacaagtgagctcagtttagaagagttggttgtatca
gacgaagttgatgtcgagtcggaaagtgatcttagtttagaagaggtagtggcatcggat
gaagttgaagtttcagctgaagagcctgttacaacagacacagaagaagaaaaaactgca
gtagaagaagacacaagtgagcttagtttagaagagttagtagcatcagacgaagttgaa
cctgagatctctattgaagagccagttacaacagacacagaagaagacacaagtgagctt
agtttagaagagttagtggcatcggatgaagttgaagtttcggctgaagagccagttaca
acggaaacagaagatgaaacaagtgagcttagtttagaagagttagtagcaacagacgaa
gttgaagtttctgctgaagagccagttataactgacacagaagaacgggcaactgcaaca
gaagaagatacaagtgagctcagtttagaagagttggtttcatcagacgaagttgaacct
gagatctctattgaagagccagttacaacttcaacagaagaacaggcaactgaagtagaa
gaagacacaagtgagctcagtttagaagagttagttgcaactgacgaagttgaatctgag
atctctattgaagagccagttacaacggcaacagaagaagaaacaagtgagcttagttta
gaagagttagtagcatcagatgaagttgaacctgagatctctattgaagagccagttaca
acggaaacagaagatgaaacaagtgagcttagtttagaagagttagttgcaacagacgaa
gttgaacctgagatctctattgaagagccagttataactgacacagaagaacaggcaact
gcaacagaagatgaaacaggtgagcttagtttagaagagttagtggcatcggatgaagtt
gaagtttcggctgaagagccagttacaacagatacagaagatgaaacaagtgaacttagt
ttagaagagctagttgcaaccgacgaagttgaacctgagatctctatcgaagagccagtt
ataactgaaacagaagaacaggcaactacaacagaagatgaaacaggtgagcttagttta
gaagagttagtagcatcggatgaagttgaagctgatatctctattgaagagccagttaca
actgaaatagaagaacaggcaactgcaacagaagaagttgatgtcgagtcggaaagtgat
cttagtttagaagaggtagtggcatcggatgaagttgaagtttcagctgaagagcctgtt
acaacagacacagaagaagaaacaactgcagtagaagaagacacaagtgagcttggttta
gaagagttagtagcatcagacgaagttgaagctgagatctctattgaagagccagttaca
acttcaacagaagaacaggcaactgcagtagaagaagacacaagtgagcttggtttagaa
gagttagtagcatcagacgaagttgaagctgagatctctattgaagagccagttacaact
tcaacagaagaacaggcaactgcaacagaagaagacacaagtgagctcagtttagaagag
ttagtagcatcagatgaagttgaaccggagatctctattgaagagccagttacaacggaa
acagaagatgaaacaagtgagcttagtttagaagagttagtagcatcagacgaagttgat
gtcgacatgccagcttctaatgatgcgcaagatatggcagaacttgaagccttaaccaat
gcattaagtgatgatgttgagtcggtaagtgatctcagtttagacgagttagttgctttg
gaagaagttggagctgaggtgttttctgaagagtctattaccgcagaaactgaagaagag
acaaatgagcttagtttagaagagttagtcgctttggaagacgttgaagcagaggtcttt
tctgaagagtctattacgccagaggctaaaaaagagacaaatgagctcagtttagaaaag
ttagctgttactgaaaaggaacttcgcatagaagagcttgcaatgagtgatgcgcaagac
ctagctacacttgaagcgttaactaatgagcttagccttgaagagttttctgagacttca
gttacaacggacaaagagacaaacgagcttagtttagaagaaattgtggaacctcctttg
agggccgctactgttgaaactcatgcacaagaaaagagcataaaagagttaacagaagag
ctttttggcctggatacagtcgtagcgacagatatgcaagaggctgttgatgaaagtttg
aatgataataatttattagcagaacaattgagtaaaaatgcatttaaggaaaatacatct
ttaccaaaagttgagccaataggagacaaaaataattttatcgatatagaaacattatta
gaagatagtaataaaaagagtagtgaagagccttatacagaattagatttggatttttct
ttagatggtttccctgatgttgtaaatagtgacacgggcgttgatgttgataatgatgat
aatggtctcgatgcgcaactggatttggcgcgtgcttatttagaaatagatgataaggca
ggggctaaaaaaatattattatcattacaagaatgctctgataaaaagaaaaaaaaggaa
atagctaaattactttctttgttaacttaa
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