Psychromonas sp. CNPT3: PCNPT3_07270
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Entry
PCNPT3_07270 CDS
T02515
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psy03016
]
PCNPT3_07270
Enzymes [BR:
psy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PCNPT3_07270
Transfer RNA biogenesis [BR:
psy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PCNPT3_07270
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Motif
Other DBs
NCBI-ProteinID:
AGH81392
UniProt:
M4U8C1
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All DBs
Position
1722117..1724078
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AA seq
653 aa
AA seq
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MFQNNALLSQLKEQIQKDIPKRQGIVKATDRGYGFLETDKGKRFFIAPQEMKKVLHGDQI
IALIRTSGEKTSAEPIQLKNTGTDVFIAKLIIKAQKISIQANNPLLKGFFKIQGGQKLVA
QGYQDGDWVKVKLLKHALQDNGFLTEVIAKVADVNDPFAYRLIAAATYHLPCTAPDFDTP
TDILDKELPREDLSDLPFFTIDGVNTQDMDDALYIEENESGWKLTIAISDPSAYVQTESD
IDIEAKNRAFTLYLPNFNVPMLPRELCESLCSLKEGEKRATLCCQLLISKQGEIIGEAKI
FAAWIKSHYRLNYNDVSDYLENEDAQWQASPVLAKQLHILNEATQQRLLWRTENNIVFKN
QPDYTLKLNNKGAVYEILCEPRRTANRLVEESMIAANICIGDFLAKYKQQGVFNTHSGIA
SDRLEKAVSLLQEYDIVYDSETLASLEGYTKMRQQVALLNNSYLDHRLRKLLAYADCKNT
PEAHFTMGVSHYATWTSPIRKYGDLLNHRLIKSILLEQDDIVIDDNIGQLLNEARKAQRL
AERDVNNHLYGQYFKDQVQSQWKFKAEIFDIIKAGIRVRIQENGATFFIPCSLLCKDSQY
AKQIDCNREQGKVFIAEQTELQLGDVIDVMLHNIKIETGQLIGKLAEPLSIPV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaatgcgctgcttagtcaattaaaagaacagattcaaaaagatatccct
aaacgtcaagggattgttaaagcaaccgatcgtggctatggctttttagaaacagataaa
ggaaaacgtttttttattgcgccacaagaaatgaaaaaagtactgcatggcgatcaaatc
atcgcattgatccgcacatctggtgaaaaaacaagtgcagagcctattcaactaaaaaat
actggcactgatgtttttattgcaaagcttattatcaaagcacaaaaaatatcaattcaa
gcgaacaatccgctactcaaaggtttttttaaaatacagggtggtcaaaagttagttgct
caaggctatcaagatggcgattgggtaaaagtaaagttgcttaaacatgctttacaagac
aatggttttttaactgaagtcatcgcaaaagtcgcagatgttaatgatccctttgcatat
cgcctaattgctgctgctacttatcacttaccatgcacggcccctgactttgatacgcct
accgatattcttgataaagagttgcctcgagaagatcttagcgacctgcccttttttaca
attgatggcgttaatacacaagatatggatgatgctctctatattgaagaaaatgagagt
ggttggaaacttaccatcgccatctcagatccttcggcttacgttcaaacggaaagcgac
attgatattgaggctaaaaaccgcgcgttcaccttatacttacccaactttaatgtcccc
atgttgccaagggaactttgtgagagtttatgctctttaaaagaaggagagaaacgcgcc
acattatgctgtcaacttttgataagtaaacagggtgaaattattggcgaagctaaaata
tttgcagcctggatcaaatcccattatcgcttaaattataatgatgtctccgactattta
gaaaatgaagatgcgcagtggcaagcctcgcccgtattagccaaacaactacatatttta
aatgaagccacgcaacaacgtttattgtggcgcacagaaaataatattgttttcaaaaac
cagccggattacaccttaaaactgaataacaaaggcgcggtttatgagatcctttgtgag
ccgagacgcacggcaaaccgcctcgttgaagagtcgatgatcgcggccaatatttgtatt
ggtgattttttagcaaaatataaacaacaaggtgtttttaacacccattcggggatcgcg
agcgaccgcttagaaaaggccgtctccttattgcaagaatatgacatagtttatgacagt
gaaaccttagcgagtcttgaaggctatactaaaatgcgccagcaagtcgcgctactcaat
aatagttatttagatcatcgcctgcgtaaattattggcttatgctgattgtaaaaacacg
ccagaggcgcattttacaatgggtgtttcccattatgctacttggacatcacctatccgt
aaatacggcgacctactcaaccatcgtttaattaaatctattttgttagagcaagatgat
atcgttatcgatgacaatattggccaattactcaatgaagcacgtaaagcgcaacgcctt
gctgaaagagatgtgaataaccacctttatgggcaatactttaaagatcaagtgcaatca
caatggaaatttaaagcagaaatttttgatattataaaagcggggatccgtgtacgtatc
caagaaaatggtgcgaccttctttattccctgcagcttgctttgtaaagacagtcaatat
gcaaaacaaattgactgtaatcgagagcaaggcaaggttttcattgcggagcaaacagag
ttgcaacttggcgatgttattgacgttatgctacataatatcaaaattgaaacaggccaa
cttattggtaaacttgccgagccattaagcatccccgtttaa
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