Psychromonas sp. CNPT3: PCNPT3_08270
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Entry
PCNPT3_08270 CDS
T02515
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psy03019
]
PCNPT3_08270
Messenger RNA biogenesis [BR:
psy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCNPT3_08270
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
HDOD
TRCF
Motif
Other DBs
NCBI-ProteinID:
AGH81592
LinkDB
All DBs
Position
complement(1959890..1960756)
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AA seq
288 aa
AA seq
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MSNYQEIQPYLIFEKLFKGQFIHGIYRLAGYLLLQDKKQRPYWKMIFSDVHGSICMYMFN
QPSEIEYLGNGVFVELTGEVKTYGKQHYIEIITLKRITLHQITDQIALVNLPANYCPDPN
NLMRLYNVLSMIENRSLLHFIAEVIVPMDICIPFLQAPASLNYHHNYAGGLLAHTVEVAE
IVSRLPLQTKIEQDLAITGATLHDIGKVKSIDGRMRRLETGKWVDHSALTLEVCANALST
LEKTNSLFTNILRNTWTCASPAARYGYEPKTAVAEAVQMADRFSAKKH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattatcaagaaattcaaccttatttaatatttgaaaagttatttaaaggccaa
tttattcatggcatataccgtctggcgggatatttattgttacaggataagaaacaacga
ccttattggaaaatgatattttccgatgtgcatgggtcaatttgcatgtatatgtttaac
caaccaagtgaaattgaatatttaggaaatggtgtatttgttgaattaaccggggaagtt
aaaacctatggaaaacaacattatattgaaataataacactgaaaagaataacgcttcat
caaattacggatcaaatcgcattggttaatttacctgctaattattgcccggatccaaat
aacctaatgcgtttgtataacgtattatctatgattgaaaatagatcattgttgcacttt
atagctgaagttattgtgcctatggatatatgtattccatttttacaagcaccagcaagc
ttaaattaccatcataattatgctggtggcttacttgcacatacagtcgaagtcgccgaa
attgtatctaggttgccattacagacaaagattgaacaagacttggcgatcacgggagcc
actttacatgatattggaaaagtaaaatctatcgatggaagaatgagacgtttagaaaca
ggtaaatgggttgatcatagtgcattaacattggaagtttgtgcaaacgcgctatcaaca
cttgaaaaaactaattctttattcacgaatattctaagaaatacctggacgtgtgcgagc
ccagcagctcgatatggctatgaacctaaaacagcagtggcagaagcggtgcagatggcg
gataggtttagtgctaaaaagcattaa
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