Psychromonas sp. CNPT3: PCNPT3_08415
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Entry
PCNPT3_08415 CDS
T02515
Name
(GenBank) transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psy03000
]
PCNPT3_08415
Transcription factors [BR:
psy03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCNPT3_08415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
Mg_chelatase
AAA_2
HTH_8
AAA
bpMoxR
AAA_19
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AGH81621
UniProt:
M4U7M0
LinkDB
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Position
complement(1989718..1991274)
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AA seq
518 aa
AA seq
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MVQWLKIASELTAIHDCNELALKFIEALKTELHLSAAHILFPCADGRNLMAINHPQKLLW
GVNDFDSPFAHALQSASLMRLDAKRLLYWRSNSAFCALMSNISRTDSVLILPLCEVENKV
KALLVVMAPPAIIDAVLAENDCIQFSKLFLRHWQMIQDKGQQENQKTVLNESITRLRQQE
SQRGMSINLTSKLIGSSDLINRLRTQIVTAAQSGLSVLIQGETGTGKELVARAVHDLSAR
NKGSFIAINCAATPESLLESEWFGHAKGAFSGAERKKKGLVEEADGGTLFLDEIGDMPLA
LQAKLLRVLETHKFRPVGSEKEISSDFRLVAATHVNLRSRVESGDFRHDLYYRLYQYPLL
LPTLKERADDISELALHFVDKFNEDHKTNIRGICYSALDHLCSYSFPGNVRELRHLIEFA
CAQTANGEEVGIESFDDRALILGLETDISMTAVDEVKKKKKQIIDIRNLKLALQNYEREI
IRSRLLQFSGDRTKAAESLGLPKRTLAGKCLKFKLKVK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggttcagtggcttaaaatagcaagtgaattaaccgctatacatgactgtaatgaattg
gcacttaaatttattgaggcattaaagaccgagttacatttgtctgctgcgcacatatta
tttccgtgtgccgatgggcgaaacttaatggcgattaatcatcctcaaaagttactttgg
ggggttaatgattttgatagcccttttgcacacgcgttgcaatctgcatctttaatgcga
cttgatgcgaaacgattactttattggcgctctaattcggctttttgcgctttaatgagc
aatatttcacgtacggatagtgtcttgatcttgcctctttgcgaggtagaaaataaggta
aaagcattattagttgtgatggcgccacctgcaattattgacgcggtgctagctgaaaat
gactgtatacaatttagtaaattatttcttcgtcattggcaaatgatccaagataaaggt
caacaagaaaatcaaaaaacagttttaaatgagtctattacacgtttacgtcaacaagag
agtcaacgtggaatgtcaattaatttaaccagtaaattaattggtagcagtgatctaatt
aatcgattacgcactcaaatcgtcactgctgcacaatcagggctgagcgtactaatacaa
ggtgaaacgggtacgggtaaagagcttgtagcgcgtgcagtacatgacttatctgctcgt
aataaaggttcttttattgcaatcaattgtgcagcaacgccggagagtttacttgaaagt
gaatggtttggacatgcaaaaggggcattttctggcgctgagcgtaaaaaaaaaggttta
gtggaagaggcagatggaggcactttatttttagatgaaataggtgatatgcctttggct
ttacaggctaaattattacgtgttttagagacgcataaatttcgccctgtcggctcagag
aaggaaataagctctgattttcgtctggttgcagccacccatgttaatttgcgaagtcgg
gttgagtcaggtgattttcgtcatgatttatattatcggttatatcaatatccgttactt
ttaccaacattaaaagagcgtgctgatgatatttcagaattagcattgcactttgttgat
aaatttaatgaggatcataaaacgaatattagaggcatttgttacagcgcgctagatcat
ctatgcagttacagttttcctggcaatgttcgtgaattacgtcatttgatagagtttgct
tgtgcacaaacggctaatggtgaagaggttggaattgaaagttttgatgatcgagcgctt
atattaggccttgagactgacataagtatgacggctgttgatgaggtgaaaaagaagaaa
aaacagattattgatattcgaaatttaaaattagcattacaaaattatgaaagagagatc
attcgttctcgtttgctgcaatttagtggtgatcgaacaaaagctgcggagagtttaggt
ttacctaaaagaactttggcaggtaaatgcttaaaatttaaattaaaggttaaatga
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