Psychromonas sp. CNPT3: PCNPT3_08925
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Entry
PCNPT3_08925 CDS
T02515
Name
(GenBank) nuclease subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_08925
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCNPT3_08925
Archaeal homologous recombinant proteins
PCNPT3_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGH81723
UniProt:
M4U5P0
LinkDB
All DBs
Position
complement(2107816..2111517)
Genome browser
AA seq
1233 aa
AA seq
DB search
MKILSLRFENLNSLKGHWKIDFQSAAFIENGLFVITGQTGAGKSTILDALCLALYQQTPR
LDKLTQAKNELMTRGEGSCLAEVEFSVKDKAYRVFWGQNRARKKGSGKLQAPTCELAEQS
GKVLASKSSDVLKQVVELTGLDFSRFTKSMLLAQGGFAAFLNATPKDRAELLEELTGTEI
YAQISKHIFERNKEVQAEFTLLAQQSELIDRLTGPEKVQLEEDIALLHSQKEQLLLRIEA
TNNAVLWKHEEGRLQEKLEDILTQLKTAEQALQSFSVQVLKIENAQQALRLQPSFVKLKT
QRQLFDDNELQSGIQKDKVDVLQVQVTQSQQELQRWVSLLAKAKQTRHQKMQCLTQELIP
MDAKLQTMTLDVQDKTRLNQQRESEYQQALQLMHQKETALEVQQQGLQNIKVQLDMLQDS
SIEQRDMGTMGHLLTTYEQHLLQLQCAQKTQSEIQEEKVQVEANQKQQKALQIASEQQYK
TVLKKLDEIDLQQENILTSLDSGSMALAREQLSTLHQQKDNLQKLQQLTINVDVLMQAEL
DRRQEIHTLEAQLHADNTQLESLEAQGKTLNREASDLSLLLQQDNALRSLQQLQLELKAH
QPCPLCGALEHPAIGSLLVPLDRSATEQRFKHKDEALQTKRGEYDQLKGQIQGSKNYLQA
LMDQLQQLQQKIQEAQKNWLLSPYVNAENISYQVTTSTLLTEKLSIQTAQMQQLTAQITR
LQEIDEQRQPLIKEKERNLAKANEAQGRWQVTFTLQQGLDEKVHQVALQLDVLNREMENL
KTNIQSIVTDKTQLDALFKAPVIWWDKQQKIAGQVENLLIKQNNNTQTLKDAEHSVQLQS
QQTEQYHIITVSTQVELEKFKETKNQLENTRVQGFGVQTHQQLQLEYENQYAQVQASFDV
SSENVTQLSIKLEGTQGAYTQLLSTQPLLKTAQKEAQSTLENKLLNSVFSTIDDFKVALL
DEEELSRLQSQHTQHSDQLLAKNTQRKSLEHEILMHQEKQLIADDMTQLIHQKETFNSQE
TLINETLISKKTLQRTDDINTEKQGELQIKRQLSQENALEWELLNKLIGQADGSKFREFA
QGLTLDNLVYLANQEMANLDPRYQLKRNSDEKLALQVIDCWQANSIRDVRTLSGGESFLV
SLGLALALSNLVSHKTRIESLFLDEGFGTLDENTLDIALNALERLNSTGKLIGIISHVSA
LKERINHQIQVHKGTGAGYSKLDSQYKFIPRES
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattatcactaagatttgaaaatttaaattcgttaaaaggacactggaaaata
gactttcaaagtgccgcttttattgaaaatggtttatttgttataacaggccaaaccgga
gccggtaaaagcacgatattagatgcgctttgtttggcgttgtaccaacaaacgccgcgt
ttagataaattaacacaagcaaaaaatgaattgatgacgcgcggagagggcagttgtctg
gcggaggttgaatttagtgttaaagataaagcctaccgcgttttttgggggcaaaatcga
gcgcgtaaaaaaggctctggtaaattacaagcaccaacatgtgagctcgcagagcaatca
ggcaaggtattagccagtaaaagtagtgatgtattaaagcaggtggttgagctaacagga
ttagatttttctcgttttaccaaatcgatgttattagcccaaggaggttttgcggctttt
ttaaatgcaacgcctaaagatcgcgctgaattgttagaagagttaacgggaacagaaatt
tacgctcaaatatccaagcatatttttgaacgtaataaagaagtacaagctgaatttacg
ttgctggcacaacaatcggagttaatagacaggttaactggcccagaaaaagtacaatta
gaagaggatatcgcacttttacactcccaaaaagagcagttgttactgcgcattgaagcc
acaaataatgccgtattgtggaaacatgaagagggccggttgcaggaaaaattagaggat
attctcacccaattaaaaacggcagagcaagcgctacaatcattttctgtgcaggtatta
aaaatagaaaacgctcagcaagcattacgcctgcaacctagttttgttaaattaaagacg
cagcgacaattgtttgatgataatgagctacaaagtggcatacaaaaagacaaagttgat
gtgttacaggttcaagtaacgcaaagccaacaagagttacaacgctgggtaagtttgtta
gcaaaagcgaaacaaacacggcatcaaaaaatgcaatgtttaacccaagagttgatcccg
atggatgcaaaactgcaaacgatgactctcgatgtacaagataaaacgcgtttaaatcag
caaagagaaagtgagtatcagcaagcattacaactcatgcaccaaaaagaaacggcgctt
gaggtgcaacaacaaggattgcaaaatattaaagtgcaattagacatgttgcaagatagt
tcgattgagcaacgcgacatggggacaatgggacatttgttgacaacgtatgagcagcac
ctcttgcagttacaatgcgcccaaaaaacacagtcagaaatacaagaagagaaggtgcaa
gtagaggcaaaccaaaagcaacaaaaagcattgcagattgcctctgagcagcaatataaa
acggtattaaaaaaattagacgagatagatcttcaacaagaaaatatattaacctcatta
gattcgggctctatggctttggcgcgagaacaactgagcactttgcatcagcaaaaagat
aacttacaaaaattacaacagcttacaataaatgtagatgtgctgatgcaggcagagtta
gatcgacgccaagagatccacactctcgaagcgcagttacacgcagataacacgcaatta
gagagcttagaagcccaggggaaaacgcttaatagagaggcctccgatttaagcttatta
ttgcagcaagacaatgcattacgcagtttacagcaattgcaattagagctaaaagcacat
caaccttgccctttgtgtggtgcgcttgaacatcctgctatcggatctttattagtgcct
ttagatagatcggccacagagcaacgttttaaacataaagatgaggcgttacagactaaa
cgcggggagtatgatcaattaaaagggcagatacaaggatcaaaaaattacttacaggcg
ttaatggatcaactgcaacaattacaacagaaaatacaagaggcgcaaaaaaactggctg
ttaagtccttatgtaaatgcagaaaatataagttatcaagtaacaaccagtactctttta
acagagaaactctcgatacaaacggcgcagatgcaacaattgacagcgcaaataacgcgt
ttacaagagatagatgaacagcgccaaccgctaataaaagaaaaagagcgcaatttagca
aaggcgaatgaagcgcaggggcgttggcaggtaacattcacactacaacaagggttggat
gagaaagtacatcaagttgcgttacaacttgatgtactaaatcgagaaatggaaaacctt
aaaaccaatattcagagcatagtgacagataaaacgcagttagatgcattatttaaagcg
ccggtaatttggtgggacaagcagcaaaagatagcgggtcaagttgaaaatctgttaata
aaacaaaacaacaacactcaaacgttaaaagatgcagagcatagtgtgcaattacaaagt
caacaaactgagcaatatcatattataacggtgtcgacacaggttgaattagagaaattt
aaagagacgaaaaaccaattggaaaatacacgagtgcaaggctttggcgtgcagacgcat
caacaattacagcttgaatatgaaaatcaatatgcacaagtacaggcttcttttgatgtt
tccagtgagaatgttactcagttgagcattaaattagaggggacacaaggtgcctatacg
caattgttatccacgcaaccgttactaaaaacggcgcaaaaagaggcacaaagcacactt
gaaaataaactgttaaacagtgtttttagtacgattgatgactttaaagttgccttgtta
gatgaagaggaactttcgcgtttacaatcacaacatacacaacatagcgatcagttatta
gcaaagaatacgcagaggaaaagtctggagcatgaaattctaatgcaccaggaaaaacaa
ttaatagcggacgacatgacgcaattaatacatcaaaaagagacgtttaattcccaagaa
acgctaataaatgaaacgttaattagtaagaaaacattgcaaagaacggatgatataaac
accgagaaacaaggtgaactacagattaaacgacaattaagtcaagaaaatgcattagag
tgggaactattaaataaactgatagggcaggcagatgggagtaaatttagagagtttgcg
caaggtttaacgctcgataatttagtttatttagccaatcaagagatggccaatttggat
cctcgttatcagttaaaacggaatagtgacgaaaaattagcattgcaagtgatcgattgt
tggcaagctaatagtatccgggatgtgcgtactctctctggtggtgaaagctttttagtc
agtttaggattggcgctcgcattgtcgaatttagtcagtcataaaacgcgaatagaatca
ctatttttagatgaaggctttggcacgttagatgaaaatacacttgatattgcattaaat
gcattggagcgtttaaattctacggggaaacttatcggtatcatctctcatgtaagcgct
ttaaaagagcgtattaaccatcaaatacaagtgcataaaggcactggcgcgggctacagt
aagcttgactctcaatataaatttattcctcgtgaaagctaa
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