Psychromonas sp. CNPT3: PCNPT3_08930
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Entry
PCNPT3_08930 CDS
T02515
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_08930
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCNPT3_08930
Archaeal homologous recombinant proteins
PCNPT3_08930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
IU_nuc_hydro
Motif
Other DBs
NCBI-ProteinID:
AGH81724
UniProt:
M4U631
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Position
complement(2111514..2112722)
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AA seq
402 aa
AA seq
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MKILHTSDWHLGQYFMMKSRQSEHLSFLNWLIETVSSEGVDAVIVAGDIFDSTSPPSYAR
KLYSDFIVKLQRTGCTQLIIVSGNHDSVAVLNESKNLLQCLNVSVLAGLSEDLSDHLIVL
KDKQQQDAMLVCALPFLRASDLVHSEFGLSADQKQMNLQRAIQSTYQKIYQLAKDHDGSL
PIVATGHLTALGCAVSDSVREIYIGTLSAFPASLFPKFDYIALGHLHRPQKVQNNEHIQY
CGSPIALSFDESKQTKKVLMVQFELNKSLDVRALDIPCTQKLQVISGDLESIKQQLQTLK
EATPKVTIWLEIKLKDRLYLSDVQTQLNDLVEGSTLEILKISAPMINENKQWQTQHIDTL
ETLTPQELFVHRLDAQDNLDETQKLKLEVLFAQACADLETKS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatactacacacttcagattggcatttaggtcagtactttatgatgaaaagcagg
caaagtgagcaccttagctttttaaattggctcatagagacggtttctagtgagggagtc
gatgcagtgatcgtagcgggagatattttcgatagtacatcaccgccttcttatgctcga
aagttgtacagtgattttatagtgaaattacaacgtacgggctgtactcagttaattatc
gtttcgggtaaccatgacagtgtcgccgtcttaaacgaaagtaagaatttattacaatgt
ttaaatgtttcggtgttagcaggtcttagtgaggatctaagcgatcatttgatcgtctta
aaagataaacaacagcaagatgcgatgcttgtctgcgcattacctttcttacgggccagc
gatctggtacatagcgaatttggcctttcagcagatcaaaaacaaatgaatttgcagcgg
gcaatacaatcaacctatcaaaagatataccaattagccaaagatcatgatggctcatta
cccattgttgcaactgggcatttaacggcgctcggttgcgcggtttcagactccgtacgt
gaaatttatattggcacattaagcgcctttcctgcctcgttgtttccaaagtttgattat
attgcgctagggcatttgcaccggcctcaaaaggtacaaaataatgagcatatacaatat
tgtggctcacccattgcgcttagttttgatgaaagtaagcagactaaaaaagtattaatg
gtgcaatttgaattgaacaaatcattagatgtacgcgcgttagatattccgtgtacacaa
aaactgcaagttatcagtggcgatttagaatcgattaagcagcagttacaaacattaaaa
gaagcaacacctaaggtgacgatctggctggagataaaattaaaagataggctttattta
tcggatgtacaaactcagcttaatgatttagtagaaggtagcaccttagaaattttaaaa
ataagcgcgccgatgatcaatgaaaataagcagtggcagacgcagcacatagacacttta
gaaacattaacaccgcaagagctttttgtgcatcgtctcgatgcgcaagataatttagat
gagactcagaaattaaagttagaagtactttttgcgcaagcatgtgctgatcttgagact
aaatcatga
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