Psychromonas sp. CNPT3: PCNPT3_09115
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Entry
PCNPT3_09115 CDS
T02515
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psy03021
]
PCNPT3_09115
03009 Ribosome biogenesis [BR:
psy03009
]
PCNPT3_09115
Transcription machinery [BR:
psy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PCNPT3_09115
Ribosome biogenesis [BR:
psy03009
]
Prokaryotic type
rRNA transcription factors
PCNPT3_09115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
DUF4332
KH_KhpA-B
S1
MCM6_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGH81761
UniProt:
M4U808
LinkDB
All DBs
Position
complement(2155258..2156760)
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AA seq
500 aa
AA seq
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MNNKEILLVVEAVSNEKGLPREAIFEALESALAIATKKKYEMEIEVRVEIDRETGTFETF
RRWLVLAPDAEMENSCAEMTYEAAVYDQPEIQIGEFIEDDIPSVTFDRITTQTAKQVIVQ
KVREAERAQVVEQYIEQKGELVTGVVKRMTRDSILLDLGGNAEAVIFRDEMLPRENFRPG
DRLRGLLYDVRPEARGAQLFMTRTQPEMLIELFRLEVPEIAEEMIDLMAAARDPGSRAKI
AVKSNDQRIDPIGACVGMRGARVQAISSELGGERVDIILWDDNSAQFAINAMSPAEVVSI
VVDEDSHSMDIAVEEENLAQAIGRNGQNIRLASQLTGWELNVMTVAQLQEKHQAEADSVI
GVFTKALEIDADFAAVLVDEGFTSLEEIAYVPVTELLEIDGLDENMVDELRTRAKNVLAT
KALAAEENIEGAKPAEDLLALEGLDAHLAYVFASKGIITLEDLAEQAVDDLIDIEELNEE
KAGTLIMAARNICWFSNETE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaagagattttattggtcgtagaggctgtctctaatgaaaaaggccttcct
cgtgaggccatttttgaagcattagaaagcgcgcttgccattgctacaaaaaagaaatac
gaaatggagatcgaagttcgtgttgaaatcgatcgtgaaacaggtacgtttgaaacattt
cgtcgctggttagtccttgctcctgatgcagaaatggaaaattcatgtgctgaaatgact
tatgaagcagcggtatacgatcaacctgaaatacaaattggtgaattcatcgaagatgat
attccatcggttacgtttgatcgcatcacaactcaaactgcgaagcaagttatcgtgcaa
aaagtacgtgaagctgagcgcgcacaagtagtagagcaatacattgagcaaaaaggtgaa
ttggtaactggcgttgtaaaacgcatgacccgtgacagtattttacttgatttaggtggt
aatgcagaagcggttattttccgtgatgaaatgctacctcgtgaaaatttccgtccaggc
gacagattacgtggacttttatatgatgtacgcccagaagctcgtggcgctcaattattt
atgacgcgtacacaaccagaaatgctaattgaacttttccgtcttgaagtgccagaaatt
gcagaagagatgattgatttgatggctgccgctcgagatcctggttcgcgtgcaaaaata
gctgtaaaatcaaatgaccaacgtattgacccaattggtgcgtgtgttggtatgcgtggc
gctcgtgttcaagctatctcaagtgagttaggtggtgagcgtgttgatattatcctatgg
gatgataattcagctcagtttgctattaatgcaatgtcaccagcggaagttgtttcaatt
gttgttgatgaagattctcacagcatggacattgctgttgaagaagaaaatttagcacaa
gcgataggccgtaatggtcaaaacattcgtttagcatcacagcttactggctgggaatta
aacgtaatgacagtcgcgcagctacaagaaaaacatcaggctgaagcggatagcgttatc
ggcgtatttacaaaagcattagaaattgatgcagacttcgctgcggtattagtagatgaa
ggctttacatctcttgaagaaattgcttatgtgcctgtcactgaattattagagatagat
ggccttgatgaaaatatggtcgatgagctacgtacacgcgctaagaatgttttagcaacg
aaagcgttagcggctgaagagaatattgaaggagcaaaacctgctgaagacctgcttgca
ttagagggcttagacgcacatcttgcatatgtatttgctagtaaaggcattattacactt
gaagatcttgcagaacaagcggttgatgacctgattgatattgaagaattaaacgaagaa
aaagccggtacgcttattatggctgcccgtaacatctgttggttcagtaacgaaactgaa
taa
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