Psychromonas sp. CNPT3: PCNPT3_09930
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Entry
PCNPT3_09930 CDS
T02515
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psy03021
]
PCNPT3_09930
Transcription machinery [BR:
psy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PCNPT3_09930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
PRORP
Motif
Other DBs
NCBI-ProteinID:
AGH81924
LinkDB
All DBs
Position
2333393..2336305
Genome browser
AA seq
970 aa
AA seq
DB search
MTFSLGQRWISDAESELGLGTIVAIDARMLTLLFAASGEQRLYAITEAPITRVRYNIGDE
ILSHDDKKILVSEINEVDNLIVYIGTNLETDEQVTLKETFLNNFIKFNKPQDKLFAGKID
KFERFALRYKSFTNQYQQQKSNHRGLLGARVDLIPHQFYIAEEVGKRHAPRILLADEVGL
GKTIEAGLIIHQQIITGRAKRVLIVLPENLQHQWLVEMMRRFNLHFSIFDDSRCSDAYVD
GVNPFETEQLILCSINMLRKKVHFESALEADWDLLIVDEAHHLIWHKDKPSREYQVIEAL
ANEIPGVLLLTATPEQLGHESHFARLRLLDPSRFFDYQTFVKEEATYKPVVDAVNLLLEN
KALSNEQQNAITELLSEQDVQPLLNSIEDLPPENSERQQAQHELITSLLDRHGTGRLLFR
NTRAAIKGFPKRILKSIALALPDQYKTAMKVSKMLPSGTLEEQAFSSLYPEQMYQRFEGT
TDNSWCAFDPRISWLIDLILQLKDEKILIITAQATTALAIEEALRTREAIKAGVFHEGLS
LIERDKAAAYFAQTEGGAQVMICSEIGSEGRNFQFAHQLVLFDLPINPDLLEQRIGRLDR
IGQHCDIQIYTPYLKDTAQAFLQNWYEDGLSAFTQTTPTGQMVYQKVKDKLITLLATCNN
DDNEFSDLLSITRTENTRLKKQLEQGRDRLLEINSSGLLRKSDLIDDICEIDQRPEFTTF
ALQLFDVVGVQQEDQSDHCIVLRPTEHMLTANFPGLPDDGACVTFNRQIALSRDDVHFLS
WEHPMITGGMEMILSSDTGTTSVAILKNNALPAATTFLELIYVVEAINTDNAQLSRFLPT
TPIRLLLDKTGKDLGQNVTFDSFNRQLSPINRHISRKIANTSQPLIHQLIKDSLPIAQAL
MQDILSEAKKDMQQTLQGEHDRLQILQAVNPNIREEELVFIRDQQRSFESILDKTQLKLD
AIRFIVSTQS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgacattttctttggggcaacgctggataagcgatgcagaatcagaattaggcttaggc
acaatcgtagctattgatgcgcgcatgctaacattattatttgcagcctctggtgaacag
cgactttacgctattacagaagcccccatcacccgtgttcgttataatataggggatgaa
atattaagtcatgatgataaaaaaatattagtttctgaaataaatgaagtcgataattta
attgtctatataggtactaacctagagaccgatgagcaagtcactcttaaagaaacattt
ttaaataattttattaaatttaataaaccacaagataaactttttgccggtaaaattgat
aaatttgaacgtttcgctctgcgctataaatcatttactaaccaatatcagcaacaaaaa
tccaatcacagaggattattaggtgcgcgcgttgatttgatcccacaccaattttatatc
gcagaagaagtcggtaagcgtcatgccccccgtattttattagctgatgaagtgggcctt
ggtaaaaccattgaagcgggactgattattcaccagcaaattattaccggtcgtgccaaa
cgcgttttaatcgtgctacctgaaaatctacagcatcaatggctcgtagaaatgatgcga
cgttttaacctgcactttagtatttttgatgacagtcgctgcagtgatgcttatgtcgat
ggcgtcaatccttttgaaacagagcaacttattctttgtagcattaatatgctacgtaaa
aaagttcattttgaatctgctttagaggcagactgggatctgcttattgtcgatgaagcg
catcatttaatttggcataaagacaaacctagtcgcgaatatcaagtcattgaagcactc
gcaaatgaaatacctggtgtcttattattaacagcaacaccagagcaactaggccatgaa
agtcattttgcacgcctgcgtttacttgatcctagtcgttttttcgattaccaaacgttt
gttaaagaagaagcaacatacaaacccgttgttgatgcggttaatctacttcttgaaaat
aaagccttaagtaatgagcagcaaaatgccattactgaattattatctgagcaagatgta
caacccttattaaatagtattgaagatcttcctcctgaaaacagtgaacgccaacaagct
cagcatgaattaattaccagtttgttagacagacacggtacggggcgcctactttttcgt
aatacgcgcgctgccatcaaaggttttcctaagcgcattttaaaatcaatcgcgttagca
ctacccgatcaatacaaaaccgcgatgaaagtctcaaaaatgttgccatcaggcacactt
gaagagcaagcttttagctctctttatcctgagcaaatgtatcaacgttttgaaggcact
acggataactcttggtgcgcctttgatccacgtattagttggttgattgatttaatactg
cagcttaaagatgaaaaaatactgatcattactgcgcaagccacgacggcgcttgccata
gaagaagcattacgcacacgagaagctattaaggctggcgtatttcatgaaggtttatcc
ctaattgagcgcgacaaagcagctgcttattttgcacagactgaaggtggtgcacaggtg
atgatctgctctgaaattggatctgaaggtcgaaacttccaatttgcacatcaattagtc
ctttttgatttacccatcaatccggatctattagagcaacgtattggccgcctcgataga
ataggtcaacattgcgatattcaaatttacacgccttacttaaaagacactgcacaagcc
tttttacaaaattggtatgaagatgggctatctgcatttacgcaaacaaccccgaccgga
caaatggtatatcaaaaagtaaaagataaattgataacgttacttgccacttgcaataat
gatgataatgaattttctgacttactaagcataacgcgcactgaaaatacacgtttgaaa
aaacagttagagcaaggacgagatcgtttattagaaataaactcaagtggacttctgcga
aaaagcgaccttattgatgatatttgtgaaatagatcaacgccctgaatttaccaccttt
gcgttacagctttttgatgtggtaggcgtgcaacaagaagatcaaagcgatcattgtatt
gtgctacgccctaccgagcacatgttaaccgctaacttcccgggactacctgatgatggt
gcttgtgttacctttaatcgtcaaattgcattaagccgtgacgatgtacattttttaagc
tgggaacatccgatgatcaccggcgggatggaaatgatattaagcagtgacaccgggact
acctcggttgcgattttaaagaataatgcattgcctgctgccactacgtttttagagttg
atttatgttgttgaagcaataaatactgataatgcacaattaagccgttttttaccgaca
acgcctattcgcttattattagataaaacaggcaaagatcttggccaaaatgttactttt
gatagctttaatcgacaattaagccctattaatcgtcatatcagtcgaaaaattgccaat
acatcacagcccttaatacatcaactgattaaagattctttgcctattgcccaagcatta
atgcaggatattttatctgaagcgaagaaagatatgcagcaaacactgcaaggtgaacat
gatcgcttacaaatactgcaagccgttaaccctaatattcgcgaagaagaattagtcttt
attcgggatcagcaacgtagctttgaaagcatcttagataaaacacaattaaaattagat
gccatccgctttattgtttcgacacaatcctaa
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