Psychromonas sp. CNPT3: PCNPT3_09965
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Entry
PCNPT3_09965 CDS
T02515
Name
(GenBank) chaperonin Cpn60, GroEL, large subunit of GroESL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCNPT3_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psy03019
]
PCNPT3_09965
03110 Chaperones and folding catalysts [BR:
psy03110
]
PCNPT3_09965
03029 Mitochondrial biogenesis [BR:
psy03029
]
PCNPT3_09965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psy04147
]
PCNPT3_09965
Enzymes [BR:
psy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PCNPT3_09965
Messenger RNA biogenesis [BR:
psy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PCNPT3_09965
Chaperones and folding catalysts [BR:
psy03110
]
Heat shock proteins
HSP60 / Chaperonin
PCNPT3_09965
Mitochondrial biogenesis [BR:
psy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PCNPT3_09965
Exosome [BR:
psy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PCNPT3_09965
Exosomal proteins of other body fluids (saliva and urine)
PCNPT3_09965
Exosomal proteins of breast cancer cells
PCNPT3_09965
Exosomal proteins of colorectal cancer cells
PCNPT3_09965
Exosomal proteins of bladder cancer cells
PCNPT3_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGH81931
LinkDB
All DBs
Position
complement(2353373..2355013)
Genome browser
AA seq
546 aa
AA seq
DB search
MSTKDVRFGNDARVKMLAGVDILANAVKVTLGPKGRNVVIDKAFGGPQITKDGVTVAKEI
ELEDKFENMGAQMVKEVASQTNDAAGDGTTTATVLAQAIIVEGLKAVAAGMNPMDLKRGI
DKAVKAAVIELKAISTPCSDPKAITQVGTISANSDIEIGEIISEAMQKVGKEGVITVEEG
QGLENELDVVEGMQFDRGYLSPYFTTNQEMGTVELEAPFILLVDKKIGNIRELLPTLEAV
AKASRPLLILAEDVEGEALATLVINNMRGIVKVAAVKAPGFGDRRKAMLQDIAALTAGTV
ISEEIGLDLEKVQLSDLGQAKRIVISKDETTIIDGAGDQKTIQARVSQIKQLIEASSSDY
DKEKLQERSAKLAGGVAVIKVGATTEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALV
RVAERLKDLKGDNADQNVGISVALRAMESPLRQIVSNCGEEASVVTNKVQEGEGNYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTECMITDTPTPASAGMPEMGGMGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaaagatgtaagatttggaaatgacgcacgcgttaaaatgttagcgggtgta
gatatattggcaaatgcggtaaaagtaacattaggtcctaaaggccgtaatgtagttatc
gataaagcgtttggtggcccacaaataactaaagatggtgtgacggttgctaaagaaatt
gaacttgaagataagtttgaaaacatgggtgctcaaatggtgaaagaagttgcttctcaa
accaatgatgctgccggtgacggaacgactactgcaactgtgcttgcacaagctatcatc
gttgaaggcctaaaagcggttgctgcgggtatgaacccaatggatcttaaacgtggtatt
gataaagcagtaaaagctgccgttattgaattaaaagctatttctacgccttgttctgat
cctaaagcgatcacacaggttggtactatttctgctaactctgatattgaaattggtgag
atcatttctgaagcgatgcagaaagtgggaaaagaaggcgtgatcactgttgaagaaggt
caaggtcttgagaatgaattagacgttgttgaaggtatgcagtttgatcgtggttaccta
tctccttatttcacaacgaatcaagaaatgggtactgttgaacttgaagcgccatttatt
ttattagttgataaaaaaatcggtaacattcgtgaactattaccgacacttgaagccgtt
gcgaaagcatctagacctcttcttattcttgctgaagatgttgaaggcgaagcacttgct
acattggttattaataacatgcgcggcattgttaaagttgcagcggtaaaagcacctggt
tttggtgatcgtcgtaaagcgatgttacaagatattgcagctttaactgcgggtactgtt
atctctgaagagattggtttagatcttgaaaaagtacaactttcagacttaggtcaagca
aaacgtattgttatcagtaaagacgaaacaaccatcattgatggtgctggtgatcaaaaa
actattcaagcacgtgttagtcaaattaaacaactgattgaagcttcatcatctgattat
gataaagagaaactacaagagcgtagtgctaaacttgctggcggcgttgctgttatcaaa
gtgggcgcaaccactgaagttgaaatgaaagagaaaaaagatcgtgttgatgatgcattg
catgcaactcgtgctgcggttgaagaaggcgttgttgcgggtggcggtgttgcattagta
cgcgttgctgaaagacttaaagacttaaaaggtgacaatgcggatcaaaacgtaggtatt
agcgtcgctttacgtgcgatggaatctccacttcgtcaaatcgtcagtaactgtggtgaa
gaagcgtctgttgtaacgaataaagtacaagaaggcgaaggtaactacggttacaatgca
gcaacgggtgaatacggtgacatgcttgaaatgggtatcttagatcctactaaagtaacg
cgtagcgcattacaatttgcagcatctgtggcgggtttgatgatcacaacagaatgtatg
atcacagatacaccaacgccagcatctgctggtatgcctgaaatgggcggtatgggtggc
ggtatgggcggtatgatgtaa
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