Psychromonas sp. CNPT3: PCNPT3_10655
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Entry
PCNPT3_10655 CDS
T02515
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psy03019
]
PCNPT3_10655
Messenger RNA biogenesis [BR:
psy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PCNPT3_10655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
fn3_2
Motif
Other DBs
NCBI-ProteinID:
AGH82069
UniProt:
M4U731
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Position
complement(2501783..2503729)
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AA seq
648 aa
AA seq
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MKFTDKFTLLTTAIVLSCITLILLGGIFSLRSLSLKYHQQRMDAIVNLIEIQLDKNIDHK
ALDAWLPDLLKVSGVIRLQLKDHENVLVDNYYENNIAYPDRLLLRFKYPLKRYPRLVLEL
ETIQPYDEVHFSFYPLLGILSAIFLSLSLLFGSVFWIKKHFRGAELLEQRAKYLLQKNPT
ARIPLAGEWPKYASKALYDLSTQLEESKKQRSHFDAFIRSQVFIDTTTGLANHFAFINRL
EIATEDNSVLSSALLIINFKELESVYWSEGETEYHKLLLQISSLLTQFVSPYEDNFLGRF
SKYEFVLMIPQVSYSETEILSKRLMKRLFLLYLPDCLDKDCFFHIGVSHFNSGDKPALLI
ENVERALLVAEHQKASGWFLEDQSILQNSLQKGSIYWGHFLEKVYTEKKVFFYQQQVISA
RQNKCHYVQLLARICKDDNPLLPPSVFLVMAKKCGFQPQMEKYILTQILGLLTKRGRNSI
AIGISISTDILLNRRVFQWFIYELMQLPKALRKKLVLEISEQCMAHHYEDLRKPLVTLQK
IGCKIAIDQVGKVVISTQYIIDFNVDYIKIHQSLIRDVQCRKNNQIALQSLVASCLNSRT
KVIALGVDNEYEWKYLRKLGIYAGQGEFLSSASSLTNSPSLCVSGVKC
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacggacaaatttacattgctgaccaccgcgattgtacttagttgtatcact
ttgattttattagggggaatatttagtttacgtagtttgtcacttaaatatcatcaacaa
cgtatggatgcgattgttaatctaatagagatacaacttgataaaaatatagatcataaa
gccttagatgcttggctccctgatttgttgaaggtatctggggtgatccgtttacaatta
aaagatcatgaaaatgttttagtcgacaattattatgaaaataatatcgcttatccagat
cgcttattattacgttttaaatatccattaaaaagatacccacgcttagttctcgaactc
gaaaccatccaaccctatgatgaagtccattttagtttttacccgttattaggcatatta
tctgctatttttttaagtttgagtttgctttttggatctgttttttggataaaaaaacac
tttagaggggccgagttattagagcaaagagctaagtacttattacaaaaaaatcccaca
gcgcgcattccattggcgggagagtggcctaaatatgccagtaaagctctgtatgattta
tcaacgcagcttgaagaaagtaaaaagcaacgtagccactttgatgcctttattcgaagt
caggtttttattgatacgacaacggggcttgctaatcactttgcatttattaaccgctta
gaaatagcgacagaagataatagtgtgttatcgagtgcattattaattatcaactttaaa
gagttagagtctgtttactggagtgagggtgaaacggaatatcataaattattattgcaa
ataagctctttattaacgcaatttgttagcccttacgaagataattttctggggcgtttt
tcaaagtatgaatttgttcttatgatcccacaagtctcatattctgaaactgagatcttg
tctaaaagattaatgaaacgtttgtttttactgtatttgccggattgtctggataaagac
tgtttctttcacattggcgtgagccattttaatagcggtgataagcctgcgttactcatc
gaaaatgtagagcgcgcgttattagttgctgagcatcaaaaagcaagtggttggttttta
gaagaccaatcaattttacaaaatagtttacaaaagggctctatctattgggggcacttt
ttagaaaaagtatacactgagaaaaaggttttcttttaccaacaacaagtgatttctgcg
cgacaaaataaatgtcactacgtgcaattattagcgcgtatatgtaaagatgataacccc
ttacttcctccctctgtttttttagtgatggctaaaaaatgtggattccagcctcagatg
gaaaaatatattcttactcagattttgggtttattaaccaaaagagggcgcaatagtatt
gcgattggtatctctatcagtactgatattttattaaacaggcgtgttttccaatggttt
atttatgaattaatgcaactccctaaggcacttcgtaaaaagttagtgcttgaaatatca
gagcaatgtatggcgcatcattatgaggacttacgtaagccgttggtaacgttgcaaaaa
ataggatgcaagattgcgattgatcaagtaggaaaagtggtcataagtacacaatatatt
attgattttaatgtggattatattaaaatccatcaaagtttgatccgcgatgtgcaatgc
agaaaaaacaatcaaattgcattgcaaagcttagtcgcaagctgcttaaacagccgtact
aaagtgattgcattgggcgtagataatgaatatgagtggaaatatttgcgaaaattaggt
atctatgcaggccaaggtgaatttttgtcctcagcatcatcattaactaacagtccctct
ttatgcgtttctggggtgaaatgttga
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