Psychromonas sp. CNPT3: PCNPT3_11120
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Entry
PCNPT3_11120 CDS
T02515
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03030
DNA replication
psy03430
Mismatch repair
psy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCNPT3_11120
03430 Mismatch repair
PCNPT3_11120
03440 Homologous recombination
PCNPT3_11120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psy03032
]
PCNPT3_11120
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_11120
Enzymes [BR:
psy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCNPT3_11120
DNA replication proteins [BR:
psy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCNPT3_11120
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCNPT3_11120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGH82160
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All DBs
Position
2618170..2618880
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AA seq
236 aa
AA seq
DB search
MNTSKVNRQVVLDTETTGMNKDGTIYLGHRIIEIGCVEVINRRLTGRHYHVYLQPDREVD
PEAVTVHGITDEFLQDKPHFADIADDFIDFIRGADLVIHNAPFDVGFMDQEFRFLNKKTQ
PTEEIATVTDTLVMAKKMFPGKRNNLDILCDRYGINTKHRTLHGALLDAEILADVYLLMS
GGQSKLNLSDDLDNMDSHTRQPRTSNNPLCIIRATAAENKAHIERLQLIKDNLWLS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaagtaaagtgaaccgacaggtcgttttagataccgaaacgacaggaatgaat
aaagatggcactatttaccttgggcatcgcatcattgaaattggttgtgttgaagtgatc
aaccgacgtttaaccggtcgccattatcatgtgtatttacaacccgatagagaggtcgat
ccagaagcggttaccgtacatgggatcaccgatgaatttttgcaagataaaccgcatttt
gcagatattgccgacgattttattgattttatccgaggtgccgatttagttattcacaat
gcgcccttcgatgtcggctttatggatcaagagtttcgttttttaaataaaaaaacccag
cccaccgaagaaatagccacggtcaccgatacattagtcatggctaaaaagatgtttccg
ggtaaacgtaataacttggatatactttgtgatcgttacggcatcaatactaagcaccga
accttgcatggggcgctactcgatgctgaaatattagccgatgtttatctgttaatgtcc
ggcgggcaaagcaaactaaacctgagtgatgaccttgataatatggacagtcatactcgt
caacctcgcacatctaacaacccgctttgcattattcgagcaaccgcagctgaaaataaa
gcgcatatagaacgcttacaattaataaaggataacttatggctctcataa
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