Psychromonas sp. CNPT3: PCNPT3_12215
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Entry
PCNPT3_12215 CDS
T02515
Name
(GenBank) NifA subfamily transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psy03000
]
PCNPT3_12215
Transcription factors [BR:
psy03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCNPT3_12215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
HTH_8
AAA_7
Mg_chelatase
AAA
nSTAND3
AAA_2
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AGH82379
UniProt:
M4U828
LinkDB
All DBs
Position
complement(2893303..2895519)
Genome browser
AA seq
738 aa
AA seq
DB search
MHLNDEFAPNDKISPIFAHLCTANNLQELVKKLNTLSAITESLQSVHLLIYHADKKNHIL
FYPEENKVNSLQLGRLEIDPKPNGVLLVKKYQTYDKKTFTDKFNDYSHLKNFSNAHSIYH
VPLSAFNRYIGKIEVVNIAPLSASGISDLEQISTVVSLVLAKIFDGNLNHHYGFQDELLG
YAKPLSVEENRADVDAALEGNSLHNHVLVEVTEAVIGQVNFEGLATVLFLHLQEHFGIEF
ISIMSFSSDSESLSCHEVNQGKEGKAQYIESQKPKAKTMEEHVIQSKKTLQLSRSDYPLL
KHKFLHVDDHYMSHKLSSECVFPLLFRQQVLGVIKYGHRAEKYFSEERLDLLKQIAARIS
VAINYFQNSSKFMMKSTPKDLMSVDKTEQSKAMFGGIISQSKAMREVFQRVLMVADCDST
VLILGETGTGKEMIANMIHNASNRSHKKMVKMNCSAVPSGLFESDLFGHVKGAFTGAVNQ
QVGRFEEAHKSSFFLDEIGDMPLQLQPKVLRALQEGEIERVGKHTIIPVDVRMIAATHCD
LLSMVKDNSFRRDLYYRLNVFPIRIPPLRERREDIPLLAKHFTQLFSKKMNRDIQSISPE
TLRILYSLPWPGNVRELKNVIERAVIMNKGQVLHLPMSELKEYFPDIDPSPLCVQDGTKK
EAGCFPDTVDLYGENTIPKNVSAVKSVKSMEREQIIKVLKETNGIVAGPKGAAHRLGLKR
TTLLSRMQRLGITSNDLI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaatgatgagtttgccccgaatgataaaataagccccatttttgcgcactta
tgtacagcgaataaccttcaagagttagttaaaaaactgaatactctttcggctattact
gaatctttgcaatcggttcaccttcttatttatcatgctgataaaaaaaaccatatttta
ttttaccctgaagaaaataaagtaaattcattacaattaggccggcttgaaatagatcca
aaacctaatggtgttctccttgtaaaaaaatatcaaacttatgataaaaaaacgtttact
gacaagtttaacgattattcacatctcaaaaacttctctaatgcacacagtatatatcac
gtcccactgagcgcatttaatcgttatattggtaaaatagaagtcgttaatatagcacca
ctgagtgcatcaggaattagtgatttagagcaaatttcgactgttgtttctcttgtttta
gcgaaaatattcgatggtaacttaaatcatcattatggattccaagacgaattacttggt
tatgctaagcccttaagtgtagaggaaaatagggcggatgtagatgctgctttagaaggg
aattccttgcataatcatgtccttgtagaggtcactgaagcagtgatcggacaagtaaac
ttcgaaggtttagcgaccgtgttgtttttgcacttacaagaacattttggtattgaattt
atcagtattatgtcattttcgtcggatagtgaaagcctaagttgccatgaagttaaccaa
ggtaaagagggtaaagcacagtatatagagagtcaaaaacccaaagcaaaaacgatggaa
gaacatgttattcaatctaaaaaaacattgcaattaagtcgctctgattatccgcttctt
aagcataaatttttacatgttgatgatcattacatgtctcataaattgagctctgaatgt
gtgtttccgttattatttcgccagcaagtattaggtgttatcaaatatggacatcgagcg
gagaaatatttttctgaagagcgtttagatttgcttaagcaaatagctgcgcgtatttct
gttgcgatcaattactttcagaacagtagcaaattcatgatgaaatcgacgccaaaagac
ctaatgtcagtagataaaactgaacaaagtaaggcaatgtttggcggtataattagtcaa
agtaaagcgatgcgggaggtttttcaacgggtattaatggttgcagattgtgatagcact
gtgttgatattaggtgaaacgggtacgggtaaagaaatgattgctaacatgatccataat
gccagcaatcgtagtcataaaaaaatggtcaagatgaactgctctgcagtaccctctggc
ttgttcgaaagtgatttatttggacatgtaaaaggcgcctttacgggggcggtgaatcaa
caagtcgggcgttttgaagaagctcataaaagtagcttttttctcgatgaaattggtgac
atgcccttgcagttgcaacctaaagtgttgcgcgctttacaagaaggcgaaatagagcgt
gttggtaagcatactattatacccgtagatgttcgtatgattgctgccacacactgtgat
ttactgagcatggttaaagataattctttccgtcgtgatttatattatcgtttaaacgtc
tttcctattcgtattccgcctttacgtgagcgccgtgaagatattcctctgctggcaaaa
cattttacgcaacttttttctaaaaaaatgaatcgagatattcaaagtatctctcctgaa
acgctacgtattctttattctttaccatggccaggtaatgttcgagagctaaaaaatgtg
atagaacgggccgttattatgaataaagggcaagtattacatctgccgatgtctgagtta
aaagagtattttccagacatcgatcctagcccgctgtgtgttcaagatggcacgaaaaag
gaagctggttgttttcctgataccgtagatctgtacggggaaaacacaataccgaagaat
gttagtgcggttaaatctgttaaaagtatggaacgagagcagattattaaggtgcttaaa
gaaaccaatggcattgtcgccggacctaaaggcgcggcgcatcgattaggtttaaaacgc
actacgctattatcgcgcatgcaacgattgggtatcacctcgaatgatcttatataa
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