Psychromonas sp. CNPT3: PCNPT3_12350
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Entry
PCNPT3_12350 CDS
T02515
Name
(GenBank) DNA-binding transcriptional regulator DhaR
KO
K05880
transcriptional activator for dhaKLM operon
Organism
psy
Psychromonas sp. CNPT3
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psy03000
]
PCNPT3_12350
Transcription factors [BR:
psy03000
]
Prokaryotic type
Other transcription factors
Others
PCNPT3_12350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
AAA_2
AAA_5
PAS_9
PAS_8
Bac_DnaA
HTH_50
AAA_7
RWP-RK
PAS_7
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AGH82406
UniProt:
M4U9V7
LinkDB
All DBs
Position
complement(2925140..2927083)
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AA seq
647 aa
AA seq
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MPNSSPFNVESVFTCWKFFQKHRWVSPEFTHSPIHDSWDRCIRQCSAYEWHKPNVASGNT
LRSFVHRNNEIVAISETVLEDAYRMLEPKDCALFVTDATGCSLAILGSEKSIEQAKQLGF
KLGAFWTEGRVGTNAVSLSLHTHQPETVFSAQHFNQNLHGYGCHAAPVFDIDGRLKACLL
LFTDMENYQPSDAALITSCAKEVSSLVQLENSLSDSNLILNQRNAVLECMDDGIIAWDKD
LRITLMNDQAASKFKLKKEHIIGSLLHKIIMLPPVIKQGIKNREKLSHLEITFECQGEFI
EALVTLRPLSNAGFLFFIHPLETIRRFAQRNIDNNVELSFDSLVTHSKKMKKVQTIAKRA
AKTKNPILLRGEDGVGKNKIAQAMHHLSDNSKGPFIIVNCKVIQAENMVRELLGCDEGEG
KLSKFELANGGTIYLEQVEFLSSEVQSALLQMLKNNLFMRTSSNRMIPVNFQLITSTSAD
LEQYVNQGTFRRHLYYAISAVELNIPSLRHRQEDIVELVHRQLLRLEKRYKTSLSITDEA
LQLLLHYSWPGNLSELQNKIEKIVLNRSGDLITIDDFPSQLLEEPIKGELSAKGYIQSLE
AIEKQAIQQAWDHFDGRVNEIATALQIGRTTLWRKLKKYQISPKIND
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatagtagtccttttaatgttgaaagtgtattcacgtgctggaagtttttccaa
aagcaccgttgggtttctcctgaatttactcattctccaattcatgactcttgggatcgc
tgcatacgtcaatgctctgcttatgaatggcataaacccaatgttgcatcaggtaataca
ttgcgctcatttgtgcatcgtaataatgaaatagtcgctatttctgaaacggtattagaa
gatgcttatcgtatgttagagcccaaagattgtgccttatttgtgaccgatgcaacgggg
tgtagtctcgcaattttaggctcagagaaaagcattgaacaagcaaagcaacttggattt
aaactcggtgcattttggactgaagggcgagtgggtactaatgcagtcagccttagcctg
catactcatcagccagaaaccgttttttcagcgcaacattttaatcaaaacctgcatggt
tatggttgtcatgcggcgcctgtttttgatattgatgggcgccttaaagcttgtctttta
ttatttactgatatggaaaattatcagccgtccgatgccgctttaatcacctcttgtgcc
aaagaagtcagtagtttagtgcagttagagaatagcttatctgattcaaatctaatttta
aaccagcgcaatgcggtattagaatgtatggatgatggcattattgcttgggataaagat
ctgcgtattaccttaatgaacgatcaagcagccagtaaatttaagttaaaaaaagaacat
attattggctcgttattacataaaatcatcatgttacctcctgttattaagcaaggtata
aaaaacagagaaaagctttctcatctggaaattacctttgaatgccaaggtgaatttata
gaggcgttagtcactttaagacccctttctaatgcgggttttctcttttttattcatcca
cttgaaacgattcgccgttttgctcagcgtaatattgataacaatgttgagcttagtttt
gattccttagtgactcactctaaaaaaatgaaaaaagtgcaaacgattgccaaaagagcg
gctaaaacaaaaaatcctattttattacgcggtgaagatggcgtcggaaaaaataaaatt
gcacaagcgatgcaccaccttagtgacaatagtaaaggcccttttatcattgttaattgt
aaagttattcaagctgaaaatatggtgcgagagttactcgggtgtgatgaaggtgaggga
aaattatcaaaatttgaattagcaaatggagggacgatttatttagaacaggtggagttt
ctgagctccgaagtacagtctgctttgttgcagatgctaaaaaacaacctgttcatgcgt
accagtagtaatcgtatgatccccgttaatttccaattgatcacctctaccagtgcagat
ctagagcagtatgttaaccaaggtacttttagacgtcacctttattatgcgatcagtgct
gttgagctcaacatcccctctctaaggcaccgccaagaagatattgttgagttagtacat
cgtcaacttctacgtttagaaaagcgttacaagacgagtctgtcgattacagatgaagca
ttacaactactgcttcattattcatggcctggtaacctttctgaattgcaaaataaaata
gaaaaaatagtattaaatcgctctggagatttaatcactattgatgactttccaagtcaa
ttattggaagagccaattaaaggggagttatctgctaaaggttatattcaaagccttgaa
gcgatcgagaaacaagcgattcaacaggcttgggatcattttgatgggcgagtgaatgaa
atcgcgacggcattacaaattggacgcacaaccttgtggcgtaaattaaaaaaatatcaa
atatccccaaaaataaatgactga
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