Psychromonas sp. CNPT3: PCNPT3_12475
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Entry
PCNPT3_12475 CDS
T02515
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
psy
Psychromonas sp. CNPT3
Pathway
psy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCNPT3_12475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psy03400
]
PCNPT3_12475
Enzymes [BR:
psy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PCNPT3_12475
DNA repair and recombination proteins [BR:
psy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PCNPT3_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGH82431
UniProt:
M4U9Y1
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All DBs
Position
2956014..2956856
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AA seq
280 aa
AA seq
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MKYIGAHVSASGGVFNAPKNAHDLGATAFALFTKNQRRWEAKPLDEDSIKKFKAACKLYG
YSAEQILPHDSYLINLGHPEVEPLEKSRLAFVDEMQRCQQLGLTLLNFHPGSHLKKIPVN
DCLLRISESINWALERTENVKAVIENTAGQGTNLGYKFEQLATIIEHVEDKSRVGICLDT
CHTFVSGYDLRTTQTCEDTFQAFSDIVGFEYLSAMHINDSKVPLGSRVDRHASLGVGEIG
WPCFEYIMKDSRFDAIPMVLETSNPDIWADEIRQLQQWAK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatatcggtgcacatgtcagtgcttcagggggggtctttaatgccccaaaaaat
gctcatgatcttggcgcgactgcatttgcgttatttactaaaaatcaacgtcgctgggaa
gccaagccacttgatgaagacagcattaaaaaatttaaagctgcctgtaaactctatggc
tattctgccgagcaaattttgccacacgattcctatttaataaacttagggcatcccgaa
gttgagcccttagaaaaatcacgtcttgcttttgtcgatgaaatgcaacgttgtcaacaa
ctcggactcacactgcttaatttccaccccggtagccaccttaaaaaaatacctgtcaat
gattgtttactacgtataagtgaaagcatcaactgggcattagagcgaaccgaaaatgtc
aaagctgtcatagaaaacacagcaggccaaggtaccaacttaggctataaatttgaacaa
ttagccaccattattgaacatgtagaagataaaagtcgtgtcggcatatgtttagacact
tgccatacttttgtatccggttatgatttaagaacgacacaaacctgtgaagatacgttc
caagccttttctgatattgttggctttgagtatttaagtgcgatgcacatcaatgatagt
aaagtgcctttaggtagtcgcgtagatagacatgcctctctcggcgtaggcgaaattggt
tggccttgttttgagtatattatgaaagatagtcgttttgacgctataccaatggtttta
gagacatcaaaccccgacatttgggctgatgaaatacgacaattacaacaatgggcgaaa
taa
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