Psychrobacter sp. AntiMn-1: AOT82_1106
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Entry
AOT82_1106 CDS
T04964
Name
(GenBank) putative exonuclease
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
psya
Psychrobacter sp. AntiMn-1
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psya03032
]
AOT82_1106
03029 Mitochondrial biogenesis [BR:
psya03029
]
AOT82_1106
Enzymes [BR:
psya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AOT82_1106
DNA replication proteins [BR:
psya03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
AOT82_1106
Mitochondrial biogenesis [BR:
psya03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
AOT82_1106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
HTH_40
AAA_22
SH3_13
Pif1_2B_dom
Viral_helicase1
AAA_5
AAA_16
Herpes_Helicase
DEAD
AAA_24
NTPase_1
nSTAND3
T2SSE
HTH_5
PhoH
TrwB_AAD_bind
AAA_14
nSTAND_NTPase5
AAA_7
UvrD_C_2
Microtub_bd
HTH_24
UvrD-helicase
MarR_2
AAA
GOLD_2
Helitron_like_N
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AOY43485
LinkDB
All DBs
Position
complement(1238536..1240473)
Genome browser
AA seq
645 aa
AA seq
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MRQSSALDILKTGQNVFLTGSAGSGKTYTLNQYIDYLRARRVPVAVTASTGIAATHMNGT
TIHSWSGIGIKDELSDRDLTNLSRKQFLADRLKDTAVLVIDEISMLHAKQLNLVSQVLKH
VRKNDKAFGGIQVVVAGDFFQLPPIGSKGESNREKFAFMSEAWLDAKFHICYLSEQHRQV
SEAANGGLDLDDILNQIRRQEVTFEAIAALENTYDQSVDIKRTRLYTHNLNVNKINDKEL
ALLDGEMMRFEATTTGDSKLVETLKKTVRTQDELVLKVGAKVMFIKNNAELGVSNGTMGE
LIGFAAVKIEDKESSDALIEDDSSDDIDEEAAGEKTAKAKKSAAKKDKEKPKSKKPTTQK
MPVVRLNSGREVIAEPEEWIIEDETGEVLASYLQVPLCLAWAITIHKSQGMTLDAAEIDL
SRTFELGQGYVALSRLKSLAGLQLLGMNDMSLQLDPLARGADKRFLVLSEEADANYAMLD
EESMQQAHEKFVLKSGGTLSQSVIDAYAALQKKRREQQQAQIDKKQKLGNQVSDKSESTL
LATRVLLEESLTIAEISQARQLSQSTIMRHIGELKSQDPSLACDHLRPEDEVMTAVGNAY
VAIKVANNPNDFNDDGSIKLRPIFDHLKQSIDYNTIRLALIFITP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaatcttctgctcttgatattctaaaaacaggtcaaaacgtctttttgactggc
tcagcaggttcaggtaagacgtataccctcaatcaatacatcgattatctacgcgctcgc
cgtgtacctgttgcggtgacggccagtactggtattgccgccacgcatatgaatggcaca
acgattcatagttggtcgggtattggtatcaaagatgagctgtctgatcgcgatttgacc
aatttatctcgtaagcagtttttggcagacagattgaaagacacggcagtactggtcatc
gatgagatatcgatgctacatgccaagcagctcaatttggtcagccaagtgctcaagcat
gtccgcaaaaacgacaaagcctttggcggcatccaagtcgtggtcgcaggagattttttt
cagttgccaccgattggtagtaaaggcgagagcaatcgtgaaaagttcgcctttatgtct
gaggcgtggctcgatgccaaatttcatatttgctatctgtcagagcagcatcgacaggtt
agcgaagcggcaaatggtggtttagacttagatgatattctcaaccaaatccgtcgtcag
gaagtgacctttgaggcgattgccgctttagagaatacttacgatcaaagcgtcgatatc
aagcgtactcgcctgtacacgcacaatctcaatgtcaataagattaatgacaaggagctg
gcactgttagacggtgagatgatgcgttttgaagccacaaccacgggcgatagtaagctg
gttgaaaccttaaaaaagaccgtacgtactcaagacgagttggttctcaaggtgggcgcc
aaggtcatgtttatcaaaaacaatgccgagcttggggtgtccaacgggacgatgggtgag
ctgattggttttgctgcggtcaaaatagaggataaggaaagtagtgacgcgttaatcgaa
gacgatagcagcgatgacattgatgaggaagctgctggcgaaaaaacggcaaaagctaag
aagtccgctgctaaaaaagacaaagaaaagccaaagtcgaagaaaccaacgacccagaaa
atgcctgtcgtgcggcttaattcaggacgagaagtcatcgctgagcctgaggagtggatc
atcgaagatgagacgggtgaggtgctagcaagttacttacaagtaccgctgtgtctggca
tgggcgatcaccattcacaagtcgcaaggcatgaccctcgatgccgctgagattgattta
tcgcgtacctttgagttgggacaaggttatgtggccttatcacgtctcaaatcgctggca
ggattgcagctactgggtatgaatgacatgagcttgcaacttgatccactggcacgcggc
gcagacaagcggtttttggtcctgtctgaagaggctgatgccaactatgcgatgctggat
gaagaaagtatgcagcaggcgcatgagaagtttgttttaaagtcaggtggtacgctcagt
caatccgtgattgacgcctatgccgcgctgcaaaaaaagcgccgcgaacagcaacaagcg
caaatcgataaaaaacagaaattaggcaatcaagtctctgacaaatcagagagcactttg
cttgcaaccagagtgctattagaagagagcttgactattgcggaaatctcacaagcgcgt
caactatcacagtccaccatcatgcgccacatcggcgagctaaaatcacaagatccaagc
cttgcctgcgatcatctacgtccagaggatgaggtcatgacagcggttggcaacgcttat
gtcgccatcaaagttgccaataaccccaatgacttcaatgatgatggcagtatcaaactg
cgtccgatattcgatcatctcaagcaaagcattgactacaacaccattcgtttggcattg
atttttatcacgccatag
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