Psychrobacter sp. AntiMn-1: AOT82_1369
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Entry
AOT82_1369 CDS
T04964
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psya
Psychrobacter sp. AntiMn-1
Pathway
psya03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOT82_1369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psya03400
]
AOT82_1369
Enzymes [BR:
psya01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AOT82_1369
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOT82_1369
DNA repair and recombination proteins [BR:
psya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOT82_1369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOY43748
UniProt:
A0A1D9CZ11
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All DBs
Position
1534642..1535571
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AA seq
309 aa
AA seq
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MPELPEVETTKTSLAPLLGQQVIDIKVFQPKLRWAMPDDLSSLADYTLDSVERRAKYLVL
KFLPTVLNDNDAMVAPLKLLIHLGMSGSLQQHSYGTDKRKHDHLIVVFRDSENAKSQLHY
YDPRRFGSVLWYEDYGSKLLDHLGPEPLSEDFTAEYLYNVIQRNNLSDKDHNNTGSNKKP
STKRTQSIARAIKSVIMEQKVVVGVGNIYATESLYLSGIHPATPANQLSLEQLIILVDNI
KDILKKAIKLGGSTLRDFTVASGQTGYFQQTLNVYGRQGEHCLKCDTILENVKLNGRASV
YCPNCQPLA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaagtagaaaccaccaagactagccttgcaccattattaggacaa
caggtgattgacataaaggtctttcaacccaaactacgttgggcgatgccagatgactta
agtagtctggctgactacacgttagatagcgttgaacgccgagcaaaatatcttgttctt
aaatttttgcccacagtgcttaatgataatgatgccatggtagcaccacttaagcttttg
attcatttaggcatgtcaggtagtttacagcagcacagttatggcactgacaaacgtaaa
catgatcatctaatagtagtatttagggattctgaaaatgcaaagtctcagctacattat
tacgatccaagacgatttggctcagtattatggtatgaagattacggtagcaaattactg
gaccacttgggccctgagccactctcggaagattttaccgcagaatatctttataacgtt
attcaacgtaataacttatccgataaagatcataacaatacaggctctaacaaaaaacca
tcgaccaaacgaacacagtccatcgcacgagctatcaaatctgtcattatggaacaaaaa
gtcgtggtaggtgtcggtaatatctatgcgacggaaagcctctacctatcaggtattcac
cctgctaccccagccaatcaactgtcacttgagcagctgataattttagttgacaatatt
aaagatatattaaaaaaggctatcaaacttggcggctcaacgctacgagattttacagtc
gcgagtggtcaaacgggttattttcagcagactttaaatgtttatggtaggcaaggagag
cattgcctaaaatgcgataccattctagaaaatgttaagctcaatggtagagccagcgtt
tattgtccaaattgtcagccgttagcttaa
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