Psychrobacter sp. AntiMn-1: AOT82_1788
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Entry
AOT82_1788 CDS
T04964
Name
(GenBank) ribosomal small subunit pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
psya
Psychrobacter sp. AntiMn-1
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psya03009
]
AOT82_1788
Enzymes [BR:
psya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
AOT82_1788
Ribosome biogenesis [BR:
psya03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AOT82_1788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1330
Motif
Other DBs
NCBI-ProteinID:
AOY44167
UniProt:
A0A1D9D036
LinkDB
All DBs
Position
complement(1989146..1989850)
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AA seq
234 aa
AA seq
DB search
MRLDKFISKATELSRKESKKILHASEVTVNDEVVKDPGLHVDIINDEVLWAGEPLSVATG
NRYILLHKPEGFECTLKAKEYPIVTELIAVPELGSLRIAGRLDVDTTGALLLSDDGGWLH
RVTSPKHEHAKVYELTLADPMNEEEQAHAIKKVGEGILLEGDYEPTKPATLEFIDETHAR
LTLEQGKYHQVKRMMGYFGNKVVELHRASIGHITLDGLERGDSRFLTPEEVEKF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaatttatcagtaaagccaccgagctgtcacgcaaagagtccaaaaaa
atcctccacgcctctgaggtcaccgtcaatgatgaggtggtcaaagaccctggcctacat
gtcgatattatcaatgatgaagtgctgtgggcaggcgagccgctctcggtggcgacgggt
aatcgttatatcttgctgcataagcctgaaggctttgagtgtacgttaaaggccaaagag
tatcctatcgtcaccgaattgattgccgtaccagagctaggcagtttacgtatcgcaggt
cgcttggatgtcgataccacaggcgcactgctgcttagcgatgatggcggctggctacac
cgcgtcacaagtcccaagcacgagcacgccaaagtctatgagctaacgcttgctgatcct
atgaatgaggaggagcaagcccacgcaatcaaaaaggtgggcgaaggtatcttgttagag
ggcgattatgagccgaccaaaccggctacccttgagtttatcgatgagacgcatgcgcgg
cttacgcttgagcaaggcaaatatcatcaggtcaaacgtatgatgggctacttcggtaat
aaagtcgtcgagctgcatcgcgctagcattggccatattactttagacgggttagagcgt
ggcgatagtcgctttttaacgcctgaggaagttgagaagttttag
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