Psychrobacter sp. AntiMn-1: AOT82_2521
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Entry
AOT82_2521 CDS
T04964
Name
(GenBank) GroEL protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psya
Psychrobacter sp. AntiMn-1
Pathway
psya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOT82_2521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psya03019
]
AOT82_2521
03110 Chaperones and folding catalysts [BR:
psya03110
]
AOT82_2521
03029 Mitochondrial biogenesis [BR:
psya03029
]
AOT82_2521
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psya04147
]
AOT82_2521
Enzymes [BR:
psya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AOT82_2521
Messenger RNA biogenesis [BR:
psya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AOT82_2521
Chaperones and folding catalysts [BR:
psya03110
]
Heat shock proteins
HSP60 / Chaperonin
AOT82_2521
Mitochondrial biogenesis [BR:
psya03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AOT82_2521
Exosome [BR:
psya04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AOT82_2521
Exosomal proteins of other body fluids (saliva and urine)
AOT82_2521
Exosomal proteins of breast cancer cells
AOT82_2521
Exosomal proteins of colorectal cancer cells
AOT82_2521
Exosomal proteins of bladder cancer cells
AOT82_2521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AOY44900
LinkDB
All DBs
Position
2768973..2770622
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDVKFGIDARKQMMDGVNVLANAVRVTLGPKGRNVVIDKSFGAPTITKDGVSVAKEIE
LENKFENMGAQLVREVASRTNDVAGDGTTTATVLAQSILQEGMKSVAAGMNPMDLKRGID
KAVRAAVQEIHNLSTPADDEKAIAQVGSISANSDTKIGELISQAMQKVGKQGVITVEEGS
SFEDTLEVVEGMQFDRGYISPYFANKQDSLTAEFENPYILLVDKKISNIREIVPLLEQVM
QQSKPLLIIAEDVENEALATLVVNNMRGGLKTCAVKAPGFGDRRKAMLEDIATLTGGTVI
SEEIGLSLETATLEQLGTAKKVTVGKENTVIVDGAGNKADIENRVESINRQIAESTSDYD
KEKLQERVAKLAGGVAVIKVGAATETEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVR
AMNALSELKGDNDDQDAGINILRRAMEAPLRQIVTNAGEEASVVVNAVKNGTGNYGYNAA
SGEYGDMLEMGILDPAKVSRSALENAASVAGLMLTTEAMITDLPEKEDAMAGMGAAGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacgtaaaattcggcatagatgcccgtaaacaaatgatggacggtgtcaac
gttctagcaaacgcagtacgtgtcaccctaggccctaaaggtcgtaacgtcgttatcgat
aaatcttttggcgcgccaaccatcaccaaagatggtgtatcagttgccaaagaaatcgag
cttgaaaacaaatttgaaaacatgggtgctcagctcgttcgtgaagttgctagccgcact
aatgatgtcgctggtgatggtacgaccactgcgaccgtattggctcagtcaatcttgcaa
gaaggcatgaaatcagtcgctgctggcatgaacccaatggatcttaagcgcggtatcgac
aaagccgttcgcgcagcagttcaagaaatccataacctatcaacgcccgctgatgatgaa
aaagccatcgcgcaagtagggtctatctctgccaactcagataccaaaatcggtgaattg
atctcgcaagcgatgcaaaaagtgggtaaacaaggcgttatcaccgttgaagaagggtca
agctttgaagataccttagaagtggtcgaaggtatgcagtttgaccgtggttatatcagc
ccatactttgccaacaagcaagacagcctgactgctgaatttgaaaacccatatatccta
ttggttgacaaaaaaatcagcaatatccgtgagatcgtgccattacttgagcaagtcatg
cagcaaagcaagccattgctaatcatcgctgaagacgtagaaaacgaagcattggcaacc
ttagttgtaaacaacatgcgtggcggcctaaaaacttgtgccgttaaagcaccaggtttt
ggcgatcgtcgtaaagccatgctagaagacatcgcaacgctaacgggcggcacggtaatc
tctgaagagattggactaagcctagagacggcgacccttgagcaattgggtactgcgaaa
aaagtcactgttggtaaagaaaacaccgtgatcgttgatggcgctggtaacaaagctgac
atcgaaaaccgtgttgagtctatcaaccgtcagatcgcagagtctacttctgattacgat
aaagaaaagctacaagagcgtgttgcaaaactggcaggcggcgtagcagtaatcaaagtt
ggcgcagcgactgaaactgaaatgaaagagaagaaagaccgtgttgacgatgcgctacat
gccactcgtgccgcggttgaagaaggcgttgtacctggcggcggcgttgcattagttcgt
gcgatgaatgcattgtctgagctaaaaggcgacaacgacgaccaagacgctggtatcaac
atcctacgccgcgcgatggaagcaccattacgtcaaatcgttaccaacgctggcgaagaa
gcatcagttgtggttaacgcagtgaaaaacggcacgggcaactacggctacaatgctgcc
tctggtgagtacggcgatatgcttgagatgggtatccttgatccagcaaaagtatcacgt
tcagcgctagagaatgcagcgtcagtagcaggtctcatgctaacgactgaagccatgatt
actgatttgccagagaaagaagacgcaatggcaggtatgggcgctgctggtggaatgggc
ggtatgggtggaatgggcggtatgatgtaa
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