Psychrobacter sp. AntiMn-1: AOT82_386
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Entry
AOT82_386 CDS
T04964
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psya
Psychrobacter sp. AntiMn-1
Pathway
psya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOT82_386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psya03400
]
AOT82_386
Enzymes [BR:
psya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AOT82_386
DNA repair and recombination proteins [BR:
psya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOT82_386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
RepL
Motif
Other DBs
NCBI-ProteinID:
AOY42765
UniProt:
A0A1D9CW25
LinkDB
All DBs
Position
442057..446583
Genome browser
AA seq
1508 aa
AA seq
DB search
MTDFTDTTDIIEPTVQPNLSDDHPDVSGDSGAIVEEKEEVTPAVAVALTGRHLIEASAGT
GKTWTLTGIVLRLLIEVRRAPEQIIATTFTRAAAAEMRQRIHDRLVEFYQLLQWVNNLSA
DTKNKDNLYPNILQVLPDRGDNKNNKDKPTSNDSSIESNAKTEADEFNQDIDHDHKHAQQ
VAREKRAQVKKAREDWLKEQAKHARLNAIMDDPINLHLVGYLLDHVYSYPMAEAIRRTAL
VLTTLDKLFVGTLDSLAQKWLTEYSSETGHQQGMAIIEDSSIEQVTDSIIHDELRQFQSR
LYHEQPKLYALMDQQGKLTAVGDHKNFVSRSLNFISAPIDEIKLEQGFDFDAYEKLIDEF
AQLDLADIQPYLNPDYRKSQGFRGNSNLTNHFDALVDVHQKVVQYQLTFSSYLNERENKI
LTSLQDARYPNEDGKIKNFNKNREKEHQTLFELETISTLMALLDMIERLNQYILLILANL
NRHIVLAVRNRLPVILEERGETTFSLQMVRLNQALTGRQGDKLARYIRHHYPIALIDESQ
DINGEQAIMIESIYLPKRKRKQSDNDKQSTTKKSSHEFLLLVGDPKQAIYGFRGGDVTNY
NYMKGQFDKSTIWTLNTNRRSNAGVIHALNCWFGMPTATTADNKLAQLGSDIYYQHTKAR
KEKEGEEAKSKLSWFRDSDAKDSSLVTEVLSAQPVSILHLPNGKDGELDYDEYEITARHI
ASLLSSGQTLKDRPIQPSDIGVLARTKKDLKQVEDELVKLGVPTLTTSDVSIFETIMAED
VAALLSAMLYPYRHDMINRVLTSHLYGLSINDIKAMMTDHESGVAESDDRLNSINLNSSD
VQNTEHKKSYQDFITYLKEGAQRWQHFGVLSALHYLLDKSPIQTQGVWQALAAHPDGDRH
IMDLRHIMDVLAQYGLGMGEHELLAWFRQHIEAAPNSDWAKQYPLPTESGVQLMTIHKSK
GLEFPIVYVLGMGDASRKSGNNEKYGLYLYNAQQAPSALVQQSAKDQFIGNQRRFSPLQG
SATVEDYYTDIETKEGFDELRRLGYVAFTRASEQLYIVLRDPSNKTGFELKPVFYWFDSP
DAKFELPDRLKGTIGMLRGHNINEFYNSHYTKTVTSTDTKLTIEPTTQAIEYVPFAEVMK
TSYFYGWAKTSFTALARQLDESTQAMAVVDERIDDAIDIDMADAAMSLEPYPNSSLDSNT
SLEKIDELSLKSEEDIRFTFVKGANAGTFLHEIFEKIDFTNKSQWSGVIDRAVSSYQLPL
MYSSAEHQSRRAQGNREESSVSFNADAIDTTKHEALIAWIEEVLRTPLLASNQPLYSLNE
EQRFAELEFNMGLSERFKAEDISQLFQQYLPDETDKHVNLVPQNRTHLYRYLRGEIDLVY
EYAGKYYVVDYKSNFLGNSLSDYNENTLRKAMTKAGYWLQAAIYQVALHRFLSMRIADYV
GNESRYLGAVEYVFLRGVYSPDAQATATVSQEAIKTSESPHNGRYGLVTWDIPIDFIKGL
DALFGVPD
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgacagattttactgacacaaccgacattatcgaacctactgtacaaccaaatttatct
gacgatcatccagatgtttcgggtgactcaggggctatagttgaggaaaaagaagaagta
acaccggcggttgctgttgcattaacgggaaggcatcttatcgaagcctcagcaggtaca
ggcaaaacgtggacgctgacaggcattgtgctgcgtctcctgattgaagtgaggcgtgcg
ccagagcaaatcattgccaccacctttactcgagccgccgctgccgagatgcgtcagcgt
atccatgatcgtttggtagagttttatcagctattacaatgggtcaataacctgagtgca
gataccaagaacaaagataacttatatcccaatatattgcaggtactgcctgataggggc
gataacaagaataacaaggataagccaacaagcaacgactcaagtatcgaatcaaatgct
aaaacagaggctgatgagtttaatcaagatattgaccatgaccataaacatgctcagcag
gtggctcgagaaaagcgcgcgcaagtcaaaaaagcgcgtgaagattggttaaaagagcaa
gccaaacatgcacgcttaaacgctattatggacgatcccattaacctacatttagtcggt
tatctattagatcatgtgtatagctatccgatggcggaggcgatccggcgtactgcatta
gtgttaaccacgttggataagctgtttgtcgggacgctcgatagcttggcgcaaaagtgg
ctgaccgagtacagtagtgaaaccggtcatcagcaaggcatggcgattatagaagacagt
agtatcgagcaggttaccgatagtattatccatgatgagctgcgtcagtttcaaagccgt
ttgtatcatgagcagcccaaactgtatgcgcttatggatcagcaaggtaagctgacagca
gtaggtgatcataaaaattttgtttctcgctcgctgaattttatttctgcgccgattgat
gagataaaactagagcaaggatttgattttgatgcgtatgagaaattgattgatgagttt
gcccagttagatttggcagatattcagccctatctaaaccccgattatagaaaatctcaa
gggtttcgtggaaactctaatttaaccaatcattttgatgctcttgtcgatgttcatcaa
aaagtagtccaatatcagctgacatttagcagctacttgaatgagcgtgaaaacaagata
ttgacgtctttgcaggatgccagatatccaaatgaagatggcaaaattaaaaactttaat
aagaatagggagaaagagcaccagaccctttttgagttagagaccattagtacattaatg
gcgctcttggatatgatcgaaaggttaaatcagtatattttattgattttagccaacctc
aaccgtcatatcgtgcttgcggtacgcaatagactgccagtgattttagaggagcgaggg
gagaccacctttagtctgcagatggtgcgcttaaaccaagcactaacaggtcggcaaggc
gataagctagcacgttatatacgtcaccattaccccattgcattaattgatgagtcgcaa
gatatcaatggcgagcaagccattatgatcgaaagtatctatttgccaaagcgtaaacgt
aaacagtcggataatgacaagcaatccactaccaaaaaatccagccatgagtttttgcta
ctggttggtgacccaaagcaggcgatctatgggttccgtggcggtgacgtgaccaactat
aattatatgaaagggcagtttgacaaaagtaccatttggacgctcaacaccaaccgtcgc
tcaaatgcaggggtgattcatgcactaaactgctggtttggtatgccgacagcaacgact
gctgacaacaagctggcacagttgggcagtgatatttattaccagcatacgaaagctagg
aaagaaaaagaaggtgaggaagccaagagtaaactatcttggtttagggattcagacgca
aaagatagtagcttggtgacggaagtgctttctgctcagccggtgagcatcttgcacctg
cctaatggtaaagatggtgagcttgattatgatgagtatgaaatcaccgctcgtcatatt
gctagcttgctcagtagtggtcagacattaaaagataggccgattcagcctagtgatatt
ggagtgttggcacgtaccaaaaaagatttaaagcaggttgaagacgagttggtcaaacta
ggcgtcccaaccctgaccaccagtgacgtcagtatcttcgagacgattatggcagaagat
gtcgcagcgctactgagcgccatgctctatccgtatcgtcatgacatgattaatcgggtc
ttaaccagtcatctatatggcctaagtatcaacgatatcaaagccatgatgacggatcat
gagtcaggcgtggctgagagtgacgatagacttaatagtatcaatctaaatagtagcgat
gttcaaaatacagaacataaaaagagctatcaagattttattacgtatctaaaggaaggg
gcacagcgctggcagcattttggtgttttgtcggcgctacattacttactagataaaagc
cccatacagacacaaggcgtttggcaagcactagccgctcatccagatggcgatcgacat
atcatggatttgcgtcatatcatggatgtgttggcgcagtatggcctaggcatgggtgag
catgagctattagcttggtttaggcagcacatagaggctgcacccaacagcgattgggcg
aagcagtatccgctacccacagagtctggcgtgcagctcatgaccattcataaatcaaaa
gggcttgagtttccgatagtctatgtactgggtatgggagatgccagtaggaaatcaggt
aataatgagaagtatggtctgtatctatataatgctcagcaagcaccttcagcgttagtg
cagcaatcagcaaaggatcaatttataggtaatcagcgccgcttctcaccattgcaaggc
tctgctacggtagaggactattatactgatatcgaaacaaaagaaggctttgatgagctg
cgccgacttggttatgtggcatttacgcgggctagcgagcagctttatatcgtgctgcga
gatccaagcaacaaaacaggatttgagctaaaaccggtattttattggtttgattctcca
gacgcaaagtttgaattacctgataggctaaaaggcacgataggtatgcttagaggtcat
aatattaatgagttctataatagtcactatactaagacagtaacgtcaacagataccaaa
cttaccatcgaacccacgacacaagcgattgagtatgttccttttgctgaggtcatgaaa
acgagttatttttatggttgggctaagaccagctttacagctttggctcgtcagctagac
gaatcaacacaagcaatggctgttgttgatgagcgtattgatgatgcgatagacattgat
atggcagacgctgcaatgtcgttagagccttatcctaatagtagccttgatagtaatacg
tctctcgaaaaaattgatgagctaagtctcaagtcagaagaggatattcgctttaccttt
gtaaaaggtgctaatgcaggtacgtttttacatgagatatttgaaaaaatcgatttcact
aataaatcccagtggtctggggtgatcgatagagcggtcagtagttatcaattaccgctg
atgtatagcagtgctgaacaccaaagccgtagagcacaaggtaaccgagaagagagttct
gtctcatttaacgctgatgcaatagatacgacaaagcatgaggccttgattgcttggatt
gaagaagtgctgcgtactccgctgctagcgtccaatcagccactttattctctcaacgaa
gagcaacgctttgctgaattagagttcaatatggggctgtcagagcgctttaaagcagag
gatatcagtcagttatttcaacagtatctacctgatgagacagacaagcatgtcaatctt
gtaccgcaaaatagaacgcacttgtatcgttacttgcgtggtgagattgatttggtttat
gagtatgctggcaagtactatgtggtcgattataagagtaattttttaggaaatagccta
agcgattacaatgaaaatacactcagaaaggctatgacaaaagcaggctactggctacaa
gcagcaatttatcaagtagctttgcatcgattcctttcgatgagaattgctgattatgta
ggcaatgagtctaggtatttaggggcggtagaatatgtctttctaagaggggtatatagc
cccgacgctcaagcaactgctaccgtatcacaagaggctattaagacgagcgaatcacca
cataacggccgttatggacttgtgacgtgggatataccaatcgattttatcaaaggttta
gatgcgctatttggtgtacctgattag
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integrated database retrieval system
