Psychrobacter sp. AntiMn-1: AOT82_425
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Entry
AOT82_425 CDS
T04964
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
psya
Psychrobacter sp. AntiMn-1
Pathway
psya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOT82_425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psya03400
]
AOT82_425
DNA repair and recombination proteins [BR:
psya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOT82_425
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOT82_425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AOY42804
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Position
complement(491645..494212)
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AA seq
855 aa
AA seq
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MANPKQLEATENKTSIVKNALYNPNQENIQVRGARVHNLKNVDVDLPRNALVVFTGISGS
GKSSLAFGTLFAESQRRYLDSVSPYARRLIDQVDEPDVDTIEGLPPAVALQQQRGTPSVR
SSVGSVTTISNGLRMLYSRAGEYPAGQEMLYADAFSPNTPDGACPTCSGIGRVFEVTEDL
LVPDNTKSIRERAIAAWPPAWQGQNLSRILTTLGYDIDKPWHTLPKKTRDWILFTDETPT
VPVYPEYDIEQTREAIEKGEKPNYMGTFTSAKNFVLHSFATTQSPRTKKRVSQFMQISEC
PECHGKKLKKESLSVKFAGLDIGELSQLTLTDMAQKLEKTAHTKIADDTPNREKAIVAQR
IASDILSRIEALTRLGLGYLSLERTTPTLSPGELQRLRLATQIRSQLFGVVYVLDEPSAG
LHPADTQALLGALDELIASGNSVFVVEHDVSVIGHADWVVDVGPQAGTHGGEIVYSGPVE
GLREVAQSHTGQYLFANDTANHQSKSDTRQPTAWLKLANIERNNIIGLDVEFPLGVMTSV
TGVSGSGKSSLISQALVELISEVLGQKTVTEAPVGEADLLEQELETVTGGEIVAGMEQVR
RLININQKAIGRTPRSNLATYTGLFDDVRKLFAATKQAKAHGYDAGRFSFNTKKGRCPNC
EGLGFVSVELLFLPSVYAPCQVCHGQRYDEETLTITYRDKNIAEVLNLTVEAAHEFFVDE
APILRALDALLQVGLGYLRLGQPATELSGGEAQRIKLATELQRTQRGDTLYILDEPTTGL
HPADVSMLMTQLNGLVDAGNTVIMVEHDMQVASNSDWVIDMGPGAGDEGGLIVAQGTPED
VAQSEDSRTAPFLLV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggccaatccaaaacaattagaagcaacagaaaataagacaagtatcgtcaagaacgct
ctatacaaccctaatcaagaaaatattcaggtcagaggtgcgcgtgttcataatttaaag
aacgtcgatgtggatttaccgcgcaatgccttagtggtctttacgggtatatctggatcg
ggaaaatcatcactggcatttggtacgctatttgccgagtcacagcggcgctatcttgat
tcagtatcgccttatgccagaaggctcatcgatcaggttgatgaacccgatgtcgatact
atagaagggttaccgccagcagttgccttacagcagcagcggggtacgccgtcagtacgc
tcgtccgtcggtagtgtaacaaccatatctaatggtcttcgtatgttatactcacgagcc
ggagagtatcccgccggccaagagatgctgtatgccgatgcgttctcgcccaatacgcca
gatggtgcctgtcccacgtgttcaggtatcggccgtgtatttgaggtcaccgaggatctg
ctggtaccagataataccaaaagcattcgcgagcgagctattgccgcatggccaccggca
tggcaaggtcaaaacctgagccgtatattgaccacgctcggctatgatattgataaacct
tggcacaccctgccaaagaagacccgcgactggatcttgtttaccgatgagacaccaaca
gtgcctgtttatcctgagtatgatatagaacagacacgggaggccattgagaaaggggaa
aagccaaactatatgggtacgtttaccagtgccaaaaactttgttttgcattcttttgcc
accactcaaagcccgcgcaccaagaaacgcgtgtcgcaatttatgcagatatccgagtgt
ccagaatgtcacggcaaaaaacttaagaaagaatcactgtcggttaaatttgcaggactc
gatatcggtgagctgtcacagcttacattgacggacatggcccaaaaacttgagaaaaca
gcgcataccaagatagctgatgatacaccaaaccgcgaaaaagccatcgttgcccagcgt
attgccagtgatattctctctcgtattgaggcactaacaaggcttgggctcggttatctg
tcacttgagcgtaccacaccaacactatcgcctggtgagctacagcgattgcgattagcg
acccagattcgctcgcaactgtttggcgtggtttatgtccttgatgagccatcagcaggt
ctgcaccctgctgacacgcaggcgctacttggggcgctagatgagttgatcgcatctggt
aactcggtgtttgtggttgagcacgacgtgagtgtgattgggcatgctgattgggtggtc
gatgtcgggccacaggctggcacgcatggcggcgagattgtctatagtgggcctgtagaa
gggctacgtgaggttgcgcagtcgcatacgggtcaatatctctttgctaacgacacggcg
aatcatcagtcaaaatctgacacaaggcaaccgacagcgtggctgaaactcgcaaatatc
gagcgcaataatataatcggcttggatgttgagtttccgcttggggtgatgactagtgtc
acgggtgtctcagggtcaggtaagtcgagtcttatcagccaagcattggtagagcttatc
agtgaagtattggggcaaaagacggttactgaagcgcctgtaggtgaggcagatttgctt
gagcaagagcttgagacagtcactggtggtgaaatcgtcgctggcatggagcaagtccgt
cgtcttattaatatcaatcaaaaggcgattgggcggacaccgcgctcaaacctagcaacc
tatacaggattgttcgatgatgtgcgtaagctgtttgccgcaactaagcaagcaaaagca
catggctatgacgctggacgtttctcgtttaacaccaaaaaaggccgctgtccaaattgt
gaaggtttgggttttgtcagtgtggagctgctatttttaccaagtgtctatgcaccttgc
caggtctgtcacgggcaacgctatgatgaagaaacacttaccatcacgtatcgagataaa
aacattgctgaagtattaaatttaaccgttgaagcggctcatgagttctttgttgatgaa
gcgcctatcttgcgcgcattggatgcgttgctgcaagtggggcttggctacttacgtttg
gggcagcccgccactgagttgtcagggggtgaagcacagcgtattaagcttgccactgaa
ctacaacgcacgcaacgaggcgatacgctctatatcttagatgagccaaccacaggttta
catcctgctgatgtatccatgctgatgacgcaattaaacggtttggtcgatgcggggaac
accgtcatcatggttgagcatgatatgcaagtggccagcaatagcgactgggtgattgat
atggggccaggggcaggtgatgagggcgggttaattgtcgctcaaggtacgccagaagac
gtggcccaatcagaagacagtcgcaccgcaccgtttttattggtgtga
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