Psychrobacter sp. AntiMn-1: AOT82_450
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Entry
AOT82_450 CDS
T04964
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psya
Psychrobacter sp. AntiMn-1
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psya03400
]
AOT82_450
DNA repair and recombination proteins [BR:
psya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOT82_450
Archaeal homologous recombinant proteins
AOT82_450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
PDCD7
EPL1
CobU
Motif
Other DBs
NCBI-ProteinID:
AOY42829
UniProt:
A0A1D9CW93
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Position
518339..519910
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AA seq
523 aa
AA seq
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MPLSIASKYISVRPLKILHTSDWHLGRRLYGRLRYEEFEAFLQWLKDTISAQQVDILIVA
GDIFDTMTPSNKAQALYYEFLGKVSRSCCQHVVIVAGNHDSPTFLDAPSNVLKFLNVHVI
GTACDDLEDEVLVLGDDDNNPHCIIAAVPYLRDRDVRSSSAGESADSKDANVIKGIHAHY
DEVAAIAREQQAKLIKAHQRHIPIIATGHLFAAGGKTTDDDGVRDLYVGLLGKISADMFD
EGFDYVALGHLHVPQRVGGRESIRYSGSPIAMGFGEAKQQKQVLLVQFGAIANVDNEIIE
VNITSDSVVPHLSNTVTKVEKSAEKTAKKIASQATVYMDDLFGFDAPADNHEITTAALQA
NTDDQKQHKPKPNDSITSNKVLHHDDHNQMQVVSLPIPKFQQLAQISGDLTTISQTIKSL
TPTDSVWLEVVYTGDEIVSDLREQVQAMVDGLTCEVLKIKNTRTYNKVLNQQQTSENLQD
LNEMEVFERCLTINEVAESQKDLLRDAYGQILYHLHHEDKQAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatctattgcttctaaatatatctctgttagacctttaaaaatattgcacacg
tccgattggcacttggggcgcaggctttatggtcgtctgcgttatgaagagtttgaggca
tttttgcagtggctaaaagacaccattagcgcacagcaagtagatatattgattgtcgca
ggtgacatctttgataccatgacgcccagcaataaagcccaagcgctatattatgagttt
ttgggtaaggtctcacgttcctgctgtcagcatgtggtcattgtcgcaggcaatcatgac
tcaccgacgtttttggatgcgccaagcaatgtgctcaaatttttgaatgtccatgtgatt
gggactgcttgtgatgatttagaagatgaggtattggtcttaggtgatgatgataacaat
cctcattgcattatcgccgctgtaccctacctgcgcgaccgtgatgtacgtagcagtagc
gctggcgagtctgcggatagcaaagacgccaatgttatcaaaggtattcacgcccactat
gatgaagtagcagcgattgctagagaacagcaggccaaattaataaaagctcatcaacgg
catatccctatcattgccacaggtcatctattcgccgctggtggcaaaacaaccgatgat
gacggcgtgcgcgatctctatgttggcttacttggcaaaatctccgctgatatgtttgat
gagggttttgactatgtcgcccttgggcatttgcacgtaccacagcgcgttggcggtcgt
gagagtattcgctactcaggctcacccattgcaatgggctttggggaggcaaaacagcaa
aaacaagtattgctggtacagtttggtgctatagctaatgttgataatgaaatcatagaa
gtaaacatcacatctgatagcgttgtacctcatctatctaatacggttactaaggttgaa
aaatcagcagaaaagactgctaagaaaatagcgagtcaagccactgtctatatggatgac
ttatttggatttgacgcgccagctgataatcatgagataacaacagcggctcttcaagcg
aacactgacgatcaaaaacagcataaacccaaacctaacgactccattacttctaacaaa
gttttgcatcatgatgaccacaatcagatgcaagtagtttctctacccattccaaagttc
caacagctagcgcagatatctggtgacctaaccacaatctcacaaacgataaaatcactc
acaccaacggattctgtttggttagaggtggtttatacgggtgacgagattgtcagtgac
ttacgtgagcaagtacaagcgatggtagatgggctgacatgtgaggtattaaagattaag
aacacccgcacttataataaagtgcttaaccaacagcaaacctcggagaatttgcaagac
ttgaatgagatggaagtatttgagcgctgcttgacgattaatgaggtggctgagtcacaa
aaagacttgttgcgtgatgcctatggtcagatactttatcacttacatcatgaggacaaa
caggcagaataa
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