Psychrobacter sp. AntiMn-1: AOT82_451
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Entry
AOT82_451 CDS
T04964
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psya
Psychrobacter sp. AntiMn-1
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psya03400
]
AOT82_451
DNA repair and recombination proteins [BR:
psya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOT82_451
Archaeal homologous recombinant proteins
AOT82_451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
AAA_21
ABC_tran
NTPase_1
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AOY42830
UniProt:
A0A1D9CWA1
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Position
519989..523864
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AA seq
1291 aa
AA seq
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MRLIELRLKNLNSLKGEWHIDFADTAFTNEGIFAITGQTGAGKTTILDAICLALYGETPR
INSISKSSNEVMTRQTAECFAEVVIDLNGEQYRCRWGQRRAYNKADGNLQDATHEIAKIN
VDDSSKKDELLESTLKHTKNKIIELTRMDFQQFTRSILLAQGSFSAFLKAKADERADILE
KITGTDIYATISTHVHNKKRTEEEILSKLQYGLDGLALLDTEEEGQLRADLQSYQSTQST
QQREIQDLVEKIKWLDSVTESKEKLNTYQNDLAQAQQAQQDFIHDATRLTAANKALEIDS
QYGKLASDRNNLKRLQNEQQGINDTLPQTQNNLHQANVLLDTVKTRVQAADEALRSTLPN
IREARRLDIDITQQTQGLKEAQQRENTLSDHTQRLRLEIDHHQQQAVQNKSQLADIARNL
NGANDLNDIDGDIANFKSYCTSLKALLQDNADLNINKANQKHNTDQYQSHLRTLYPLQKD
QAAKEKALQAQIEELQQKQAELIERQSLPEIHSEQEQIDGLDRQLEQIESKADKLNELRA
QIKDIDTELPVIQDDLVVLADIITNKSSTIQSTKDKRQDKQTQLYLLQKVATLESHIADL
KDGHPCPLCGSLEHPYGANHPHLISDTEADQIQQQMIELDTTISDLENSLSVHRISQATK
QQQLERQQNQKNLLQDQAQKLAADIKQSVSLVLKENYSPFIAAMIQPLQQFETHVDIIPV
LKSTQHQLTERKASLKGTLSNYQRLGEKLATMREDISALAQQQHKLASDINGIETNIKIT
SVSINNTDKHIHDNFSELTTLKNDIIQLLERYAAGTFQSNAIAQIRASKPTLHPLMESID
SQVILNEADYHTHITTLRQQHAALITIKNELNNYKEHQQKLATELGGLEIQIDTKQTQLD
KDQQELDSLVQLVIEKIKALEQLQTHRVNVFADKDPDAEEQRLREALEQAKTDQSVAQRQ
LDSAEYTLKQLKDQREQITQQIKAAADTVQVLENQFQTALASSSFDTEAEFLAARLPMDE
RNALKQQQERIDYAHKQAQSLLKETEKALEDKQANPLTTDDKETLIQQQAQVQEKFNSCI
ESIGAISQQLRDNEDKKSTQQAQIDAINAQKEKLQVWQQLHKLIGSSDGKKYRTFAQGLT
FDLMVNHANTQLQKMSDRYLLARDDNSPLELNVIDNYQGGEIRSTKNLSGGEGFIISLAL
ALGLSQMASQNIRVDSLFLDEGFGTLDEESLDIALDTLTNLQQEGKLIGVISHVQALKDR
ILTQIKVEKLSGGFSRISGQGCHKVVSEKAS
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaatcgaactcagactcaaaaacctcaattctctcaaaggtgaatggcatatt
gattttgctgacaccgcctttaccaatgagggtatctttgcgatcacaggacagactggc
gctggcaagaccaccatcttggatgcgatttgtctggcgctatatggtgaaacaccaagg
atcaacagtatcagcaaaagcagcaatgaagtaatgacgcggcaaacagcggaatgcttc
gctgaagtcgtgattgatttaaatggtgagcagtaccgctgccgttggggacagcgccgt
gcttataataaggcagatggcaatctgcaagacgccactcatgaaattgctaagataaac
gttgatgactcatcaaaaaaagatgagctgttagagagcacgctaaaacataccaaaaat
aaaataattgaactgactcggatggactttcagcagttcactcgctctatattgctggct
cagggcagtttttcagcttttttgaaggcaaaagctgacgagcgtgccgatattttagaa
aaaattacaggcactgatatttatgccaccatttcaacacatgttcataataagaagcgc
actgaagaagagatattgagtaaactgcaatatggtttagatggcttggcacttttagat
accgaagaagaaggtcaattaagagccgatttgcagtcatatcaaagcacccagagtacg
cagcagcgagaaattcaagatttggtcgaaaagataaagtggctagatagcgtcacagaa
tcaaaagaaaaactgaacacttatcaaaatgatctagcgcaggctcagcaagctcagcaa
gactttatccatgacgctacccgcttaaccgctgccaataaggcgttggagattgatagt
caatacggaaagcttgcctctgaccgcaataatctaaaacgtttacaaaatgaacagcaa
ggaattaacgatacgctgccgcaaacacagaataacttacaccaagcgaacgtgctgcta
gataccgtaaaaactcgcgtacaagccgctgatgaggcgctgcgatccaccttacctaat
attagagaagcgcgtaggctagatatcgacattacgcagcaaacgcagggattaaaagaa
gcgcagcaaagggagaatactttatcggaccatactcagcgcttacgcctagagattgat
caccatcaacaacaagcagtacaaaataaatcccaattagcagatatagcgcgcaatctt
aatggtgcaaatgacttaaatgacatcgacggcgatattgctaattttaagagttattgc
accagtttaaaagcactactccaagacaatgctgatttaaatatcaacaaggccaaccaa
aaacacaatacagaccagtatcaaagccatcttagaaccttgtatccactacaaaaggat
caagcggctaaagaaaaagctctgcaagctcagatcgaggaattacaacaaaagcaagcc
gaattaattgaaagacagtctctacctgagatacacagcgaacaagaacagatagatggc
ctcgatcgtcagcttgaacaaatagagtcaaaagcagataagctcaatgagcttcgcgca
cagatcaaagatatagacactgagctaccagtaatacaagacgatctggtagtgctggct
gatatcattactaataaatcatccactatccaatccactaaagacaagcggcaagacaaa
caaacacagttatatctactacaaaaagtagccactctagaaagccacattgctgatcta
aaagacggtcatccttgcccgctgtgcggatcgcttgagcatccttatggcgcaaaccac
ccgcatttgatatcagataccgaagcagatcagattcagcaacaaatgatagagctggac
accaccatatccgatttggaaaacagcttatctgtacatcgtatcagtcaagcaaccaaa
cagcagcagcttgagcgacagcaaaatcagaaaaacctactacaagatcaagcacaaaaa
ctggcagctgatatcaagcagtcagtgagtttagtcctgaaggaaaactactcacctttt
atcgcggcaatgatacaaccattgcagcaatttgagacacatgtagatataataccggtg
ttaaagagcactcaacatcaattgaccgaacgtaaagcatcacttaaaggcacgctgtcc
aattatcagaggcttggcgagaagctcgctaccatgcgcgaggacattagcgcattagca
caacagcagcataagctggcaagcgatattaatgggattgagacgaatatcaaaataaca
tccgtgagtataaataatacagataaacacattcacgataatttctctgaattaaccacc
cttaaaaatgacatcattcagctcttagaaagatacgcggctggcacgtttcagtcaaac
gcaatcgcgcagatacgcgcctcgaagccaactttacatcccctgatggaaagtattgat
agccaagttatcctaaacgaggcggattatcatacgcatatcacgacattgcgtcagcag
cacgcagcgcttataaccataaaaaatgagcttaataattataaagagcatcagcaaaag
ctagcgacagaactaggcggtctagaaatacagatcgataccaaacaaacccagttggat
aaagaccaacaggagcttgatagtctggttcaactcgtgattgaaaaaataaaggcgctt
gagcagctacaaacacacagagtcaatgtcttcgccgacaaagatcccgatgcagaagag
cagcgtttgcgcgaggcattagaacaagcgaaaaccgatcagtccgttgcccaaagacaa
ctagacagtgctgaatacacgctcaagcagctaaaagaccaacgagagcagatcacccag
caaatcaaagcagcagctgataccgtgcaggttctagaaaaccagttccaaacggcactt
gcctcctccagctttgatacggaagcagaatttttggcggcgcgcttgcctatggatgag
cgtaatgcactcaaacagcagcaagaacgtattgattatgcacacaagcaagcgcaatcc
ttattgaaagaaaccgagaaagcattagaagataagcaagctaatccgctgacaacagac
gataaagaaacgcttatccagcagcaagcgcaagtccaagagaagtttaatagctgcatt
gagtcaattggtgcaatcagtcagcagttacgagacaatgaggataagaaaagcacgcaa
caggcacagattgatgccatcaatgcccaaaaagagaagttacaagtgtggcaacagcta
cataaattgattggctcgtctgatggcaaaaagtatcgtacctttgctcaaggacttacc
tttgatctgatggttaatcatgccaacactcagctgcaaaaaatgagtgatcgctacctg
ctggctcgtgatgacaatagcccgcttgagctcaacgtcattgacaattatcaaggtggc
gagattcgtagtaccaaaaatctctcaggcggtgaaggctttatcatcagtctggcgctc
gcattaggcttgtcacaaatggcgagccaaaatatccgcgtggactcgctatttttggat
gaaggttttggtaccttggatgaagagtctttggatattgcgctagatacgctgaccaac
ttgcaacaagaaggaaaattaatcggggtgatatcccatgtacaggcgctaaaagatcgt
atcttaacccaaattaaggtcgaaaagctctcgggcggctttagccgaattagtggtcaa
ggatgtcacaaagttgtcagtgaaaaagcctcgtaa
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