Psychrobacter sp. AntiMn-1: AOT82_819
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Entry
AOT82_819 CDS
T04964
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psya
Psychrobacter sp. AntiMn-1
Brite
KEGG Orthology (KO) [BR:
psya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psya03016
]
AOT82_819
Enzymes [BR:
psya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AOT82_819
Transfer RNA biogenesis [BR:
psya03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOT82_819
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
PCDO_beta_N
Motif
Other DBs
NCBI-ProteinID:
AOY43198
UniProt:
A0A1D9CXG9
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Position
complement(939146..940480)
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AA seq
444 aa
AA seq
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MSNNVSNASVKSNPSEITDNSSQKAANTEMTSVATPSESNDDALDVDAIDIDALLDVADA
VDVTWVREQHQLAEVINALATCGRVALDTEFIKRDTYYPRLALVQLNTGNHVYLLDAPEL
QLSELWEALRQVDVAIWHACGEDLGIFYLLSGCPPLTNIFDTQIALSYLTGQLQMGYQQA
LADQLDMHIDKEHSQSDWLQRPLTDEQEQYAIDDVRYLPALYLSIEHALKAQGLYDYVWA
DCQLYASDLYDLQHVEDEAMYLTMADYRYNSQQMAILKGIATWREELARATNQPRTFIIK
KQAVREIVTEKPNSMRELAHKTTMHRSMLRLYGEELLKIIRNAKNLPPAEHPACLVPPYR
SKNKILSKAVQQAIDDHAKAIGMPSSVLMRKKWLGQLYEVIALDKNLSELPQGLKGWRND
WVVQTLIPVISKHKTELQQGMGIR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaacaacgtttcaaacgcttcagtcaaatcaaacccttctgagattactgataac
tcatcacaaaaagcagctaatactgagatgacatcagtggcgacaccttcggaatcaaat
gatgatgcactggatgttgatgcaattgatatcgatgcactgttggatgtcgctgatgct
gttgatgtcacatgggtgcgtgagcagcaccaattggctgaggtgatcaatgccttggca
acttgtggccgcgtcgcactagatactgagtttatcaaacgcgacacttactatccgcgt
ttggcactcgtacagttaaatacgggtaatcacgtgtatttactagatgcgcctgagttg
caactgtctgagctgtgggaggccttgcgccaagtcgatgtggccatctggcatgcttgc
ggcgaagatttaggcattttttatctgctatctggttgtccaccattgaccaatattttt
gatacgcaaattgcgttgtcttatttaaccggtcaattacaaatgggctatcagcaggca
ttggcagatcagctagatatgcatatcgataaagagcacagtcagtctgattggctccag
cgcccgttgacagacgagcaagagcaatatgccatcgatgatgtgcgttatttgccagcg
ctgtatctcagtatcgaacatgcgcttaaggcacaaggcctatacgattacgtctgggcg
gattgtcagctctacgccagtgatttgtatgacttgcagcacgtcgaagatgaagcgatg
tatctgacgatggcagattatcgctataactcacagcaaatggcgatactcaaagggatt
gcgacgtggcgagaagagctggcacgtgcgaccaatcagccgcgtacgtttatcatcaaa
aagcaagcggtacgcgagatcgtcactgaaaaaccaaacagcatgcgtgagctggcgcac
aaaacgacgatgcaccgtagtatgctgcgtctctatggtgaagagctgcttaagataata
agaaacgccaaaaacctaccacctgccgagcatccagcttgtcttgtgccgccatatcgc
tcaaaaaacaaaatcctgtcaaaagcagtgcagcaagcgattgatgatcacgctaaggct
atcggcatgcctagcagcgttttaatgcgcaaaaaatggctaggacagttgtatgaagtg
attgctcttgataaaaatctcagcgaactgccacaaggtctcaaaggttggcgcaatgac
tgggtcgtccagacgttgattccagtgatcagcaagcataaaactgaattgcagcaaggg
atgggtattagatag
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