Psychrobacillus sp. INOP01: KD050_02180
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Entry
KD050_02180 CDS
T09653
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
psyb
Psychrobacillus sp. INOP01
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyb03019
]
KD050_02180
03009 Ribosome biogenesis [BR:
psyb03009
]
KD050_02180
Enzymes [BR:
psyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KD050_02180
Messenger RNA biogenesis [BR:
psyb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KD050_02180
Ribosome biogenesis [BR:
psyb03009
]
Prokaryotic type
rRNA helicases
KD050_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
AAA_30
DEXQc_Suv3
AAA_19
AAA_22
DUF5646
Motif
Other DBs
NCBI-ProteinID:
QUG42127
LinkDB
All DBs
Position
complement(419069..420367)
Genome browser
AA seq
432 aa
AA seq
DB search
MSKYTDYSFQPFLVDAIEKLGFQEPTPIQKEMIPLVLKGKSAIGQAHTGTGKTHSFLIPI
VEKIDASKKEVQAVITSPTRELATQIYNELNKLVEGTEIQTKLFIGGTDKARSIEKLKTQ
PQIVVGTPGRLRDLTVEQALLVHTANVLVVDEADLAFDLGFINEIDQFASRMPEKLEMYV
FSATIPEKLQPFLKKYMDSPVHIKIGEKRRVAEGIEFIVTPVRSKSRKKRLLDVMEGINP
YLAIIFANTKQHADEVANYLQGNGVKVGVVHGDISPRDRKRVMKQIHDLEFQYIVATDLA
ARGIDIPGVSHVINYELPDDLEFFVHRVGRTARAGMTGIAISLYEPSDEDALVRLEKMGI
PLEHKDVINGEWSELKERHARKNRTKNENEIDAKAKALVRKPKKVKPGYKRNMKWEMDKV
KKRERRIKNRKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatatacagattatagttttcagccttttttagtagatgcaattgaaaaatta
ggcttccaagaaccaacgccaattcaaaaagaaatgattccacttgttttaaaggggaaa
agtgcgattggtcaagcacacactggaacaggaaaaacacatagttttttgatcccaatt
gttgaaaaaatagatgctagtaaaaaagaagtacaagcagttattacatcaccaacaaga
gagcttgcaacacaaatttataatgagttgaacaagctagtagaaggcacagaaattcag
acaaaattatttattggtgggacggacaaagcccgttcaatagaaaaactaaaaacacaa
ccacaaattgttgttggaacaccaggtagacttcgtgatcttacagtagagcaagcgtta
cttgttcatactgcaaatgttttagttgtagacgaagcggatttagctttcgatcttgga
tttatcaatgaaatcgatcaatttgcgtctcgtatgcctgagaagctagaaatgtatgtt
ttttctgctacaattccagaaaaattacaacctttcttaaagaaatatatggattcacca
gtccatatcaaaataggcgaaaaacgtcgtgtagcagagggtattgaatttattgtaact
ccagttcgaagtaaatctaggaagaaacgtttactggatgttatggaaggtataaatccc
tacctagccattatatttgcaaatacgaaacaacatgcagatgaagtagcaaattattta
caaggtaatggtgttaaagttggcgtggtacatggtgacatatcacctcgtgatcgtaaa
cgtgtgatgaaacaaatacatgatctagaatttcaatatattgttgcaacggatttagct
gcacgagggattgatattcctggagtcagccatgttatcaactatgaacttccagatgat
ttagagtttttcgttcaccgtgtaggaagaacagcacgtgctgggatgacaggtatcgct
atttcattatatgaaccatcggacgaggatgctttagtacgtcttgagaaaatgggtatt
cctctcgaacataaagatgtgattaatggagaatggtcagagcttaaggagcgccacgca
cgaaaaaaccgtactaaaaatgaaaatgagatagatgcaaaagctaaggccctagttcgt
aagcctaaaaaggtaaaacctggctacaagcgtaatatgaaatgggaaatggataaagtg
aagaaaagagagagacgtattaaaaaccgtaagaaataa
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