Psychrobacillus sp. INOP01: KD050_03265
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Entry
KD050_03265 CDS
T09653
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03030
DNA replication
psyb03410
Base excision repair
psyb03420
Nucleotide excision repair
psyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KD050_03265 (polA)
03410 Base excision repair
KD050_03265 (polA)
03420 Nucleotide excision repair
KD050_03265 (polA)
03440 Homologous recombination
KD050_03265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyb03032
]
KD050_03265 (polA)
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_03265 (polA)
Enzymes [BR:
psyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KD050_03265 (polA)
DNA replication proteins [BR:
psyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KD050_03265 (polA)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KD050_03265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KD050_03265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QUG42326
LinkDB
All DBs
Position
complement(641768..644395)
Genome browser
AA seq
875 aa
AA seq
DB search
MSSEKILLLDGNSLAYRAFFALPLLTNEHGIHTNAVYGFTMMLQKIMEEENPTHMLVAFD
AGKTTFRHSTFGEYKGGRQKTPPELSEQFPYIRKLIDAYGIKRYELEMYEADDIIGTLSK
QADVKGQEVVVVSGDKDLTQLATDKTTVYITRKGITDIEKYTPEHVQEKYGLTPLQIIDM
KGLMGDASDNIPGVPGVGEKTAIKLLKEHGSVEDLYKALDKVSGAKLKEKLVANEEQAIM
SKALATIETNAPIEVSIEDILYNGPNMEDVIEVWKELSFKTLLEKSEYVSEEPETTEVEF
QIIDQIDSTILDDVMAVHLEMYNEQYHTSELLGIALSNGEKCYFVAGEVAFQSNEFCSWL
ANDSNKKYLADSKATQAVSRKHDVTILGVEFDLLLAAYIVNPAISSEDVAAIAKEFGYSN
VLANDSVYGKGAKKSAPEIEKIAEHASRKAKAVWELKARLEVKLEENEQYALYKEIELPL
ASILGTMESDGVLVDKKILVEMGHELNIKLQAIEQDIYTLAGETFNINSPKQLGVILFEK
IGLTPIKKTKTGYSTAADVLEKLASEHEIIEQILLYRQLGKLNSTYIEGLLKEIHEDDGK
IHTRYQQALTSTGRLSSINPNLQNIPVRLEEGRKIRKAFVPSQPGWVMFAADYSQIELRV
LAHMSKDENLVDAFNNDLDIHTKTAMDVFHVEQEAVTSDMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAAKFIENYLNSFPGVKEYMDDIVHEAKQTGYVTTILNRRRYLPEITSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMAARLKTENMQTKMLLQVHDELIFEAPPEEI
PLLEKIVPEVMENAIKLVVPLKVDYAFGSSWYDTK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaaaaaattctattattagatggcaacagtttggcttatcgagcttttttt
gccctgcccttattaactaacgaacatggcatacatacaaatgcagtgtatggctttaca
atgatgcttcaaaaaattatggaagaagaaaatccaacccatatgttagtggcatttgat
gctggaaaaacaactttccgtcattctacatttggcgaatataaaggtggaagacaaaaa
acacctcctgagctttcagaacaatttccttatatacgtaagttgatcgatgcttatggc
attaagcgatacgaactggaaatgtatgaggcggacgatattattggcacattgagtaaa
caagcggatgtaaagggtcaagaggttgtggtagtttctggagataaagatttaacgcag
cttgcgacagataagactactgtatatattacgcgaaaaggcatcactgatattgaaaaa
tacacacctgaacatgtgcaagaaaagtatggtttaactcctctacagattattgatatg
aaaggcttaatgggtgatgcttcagataatattcctggagtgcctggtgtaggagaaaag
acagctattaagcttttaaaggaacatggttcagtagaggatctgtacaaagcacttgat
aaagtgagtggtgccaagttaaaggaaaaacttgttgccaatgaagaacaggcaattatg
agtaaggcattagctacaattgaaacaaatgcgccaatagaggtttctattgaggatatt
ttatataatggtccgaatatggaagatgtaattgaagtttggaaggaactatcctttaaa
acacttctggagaaatcagaatatgtttcagaagagccagaaacgacagaggtagaattc
cagattatagaccaaattgactccacaattttagacgatgtaatggccgtacatttagaa
atgtataatgagcaatatcatacaagtgaactgttaggcattgctttgtcgaatggtgaa
aaatgttattttgtagcgggtgaagtagcatttcaatccaatgagttttgttcatggtta
gcgaatgattcgaacaaaaaatatttagcagattcaaaggcaactcaagcagtgagtaga
aaacatgatgttactattcttggagttgaatttgatctactattagcagcgtatatagtt
aatccagcaatttcgtcagaggacgtcgcagcaattgcgaaagaatttggttactctaac
gtgttggccaatgacagtgtttacggaaaaggcgctaaaaaatctgcgcctgaaatagag
aaaattgcagaacatgcctctagaaaagcaaaggcagtatgggagttaaaagcaagatta
gaagtaaagctagaagaaaatgaacaatacgcattgtataaagaaattgaattacctctt
gcttctatccttggtacgatggaatcggacggagtattggtggataaaaaaatactagta
gaaatgggtcatgagctaaatattaaattacaggcgattgaacaagatatctatactcta
gctggggaaacttttaatattaattcaccgaaacaattaggtgtaatattatttgaaaaa
ataggtcttacacctattaaaaaaacgaaaacaggctattcaactgcagcggatgttcta
gaaaaactagcaagtgaacatgaaataatcgagcaaattcttctatatcgacaattaggt
aagctcaattcaacgtatattgaaggattgttaaaagagattcatgaagatgatgggaaa
attcatacacgttatcaacaagcgctaacttcaactggacgtttgagttcgataaatcca
aatctgcaaaatataccagtacgtttagaagaaggtagaaaaatacgtaaagcctttgtt
ccttctcaaccaggttgggtaatgtttgcagcagattactctcagattgaattacgtgtt
cttgcgcatatgtctaaggatgaaaatctagtagatgcttttaataatgatttagatatt
catactaaaacagctatggatgtctttcatgtggagcaggaagctgtgacatccgatatg
cgtcgtgccgccaaggcggtaaactttggtatcgtatatggtatcagcgattatggttta
tcacaaaatctggatattactagaaaagaagcagcgaaatttatcgagaattatttaaac
agcttcccaggagtaaaagaatatatggatgatattgttcatgaggcaaaacaaacaggc
tacgttacaacaatcctaaatagaagaagatatttaccggaaataacaagttctaacttt
aatttacgcagctttgcagaacgtacagcgatgaatacaccaattcaaggaagcgcagca
gatattatcaaaaaagcaatgattgatatggcagcaagattgaaaacagaaaatatgcaa
acgaaaatgctactgcaagtacatgatgaactgatcttcgaggcacctccagaggaaatt
ccattacttgaaaaaatagttccggaggtaatggaaaatgctattaagctggttgtacct
ttaaaagtcgattatgccttcgggtcatcttggtatgacacgaagtag
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