Psychrobacillus sp. INOP01: KD050_03350
Help
Entry
KD050_03350 CDS
T09653
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03030
DNA replication
psyb03430
Mismatch repair
psyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KD050_03350 (dnaE)
03430 Mismatch repair
KD050_03350 (dnaE)
03440 Homologous recombination
KD050_03350 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyb03032
]
KD050_03350 (dnaE)
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_03350 (dnaE)
Enzymes [BR:
psyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KD050_03350 (dnaE)
DNA replication proteins [BR:
psyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KD050_03350 (dnaE)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KD050_03350 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QUG42342
LinkDB
All DBs
Position
complement(662747..665806)
Genome browser
AA seq
1019 aa
AA seq
DB search
MKTVYPQIVTSADMLKSTIQLEPLTQKLKQNNARAAAITNSRLYGLLPFWHALHAQKIKP
VLGLTVNVQLESNIVGLVLYAKDHNGYENLLKISSSIETRDITTLPKRWLEAYKSGLIAV
YKGESSTSLEQLTELQRIFGHVNFYLAMDRPNGEKLDYEEIIIQLGEQLSIPITAFHMSR
YIEKEDAFAYEVLNAMDQSLKMNDHARLKPSSNSLHLLSGEEWSEWFSDVPNWIENTEQM
LNSCNVTIEKTALIMPKYPLPETKNSKDFLRELCEDGLSKRIKEITKPYLERLNYELSII
NQMNYEDYFLIVQDFVKFSKQQNILTGPGRGSSASSLVAFSLNITDVDPLRYGLLFERFL
NPERITMPDIDIDFADSRRMEVIQYVVEKYGKNYVSQIITFGTLSAKAAAREVARVFGFE
STTLEAISSFIPAKPGITLNEAYTMSEKLREFIQTEDIRKKWFQVALALEGLPRNASTHA
AGVVLSPVSLVDVIPIQGGHEDIYLTQWPMKEVEQVGLLKMDFLGLRNLTIIERILKIIN
YKQSNPFKLTEIPLHDELTFRLLQQGDTTGVFQLESAGMRQALKQINPTKFEDVVAVNAL
FRPGPMESIPLYAKRKAGQAPVSYEHPILEPILKETYGIIVYQEQIMQIASKMAGFTFGE
ADLLRRAVSKKNREVLQSERVHFVQKAILEGHSEQSASAVYDLIVRFADYGFPKSHAVAY
SVISFQMAYLKAHFPVAFYSALLSIATGNQAKINELMMEMKQKDMAILAPSIFRSQRFFT
VERGGVRFGLQAIKGVSYNFIQKLLQKRMERETKWEDIFDLASDLSAVHFTRKNVEPLIK
AGALDEFGFERSTLLATLDAAVKYAELISPTEESDLFGGDASHFGKSKYIKSDPLPIMEK
LQFEKEVLGQYFSEHPTVSKKKMLTDKFINIWDILQTTRDMPVKIVGLIQDIKRIRTKKG
EAMAFLTVQDDTGSLSVTLFPEEYAKFNTLLKEQEMLVITGKSERRNGRSQIITKYMEK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtatatccacaaattgtgacatcggcggatatgctgaagagcacaatacaa
ttggaaccacttacgcaaaagctaaaacagaataatgcgagggcagctgccataacaaat
agtagattgtatggattactgcctttttggcatgcattacatgcgcaaaagattaaacct
gtacttggactcaccgtaaatgttcaattagagtcaaatattgtaggtctggtgttatac
gctaaagatcataatggttatgaaaatttgttaaaaatatcaagtagtatcgagacaaga
gatattacaacgctacctaagagatggttagaagcatataaaagtggattgatcgctgtt
tacaaaggagagtcttctacttcgttagagcagcttactgaattacaaaggatatttgga
catgtaaatttctacctagcaatggaccgacctaacggtgaaaaactagactacgaagaa
ataatcatccagttgggtgaacagttgtctataccaattactgcattccatatgagtcga
tacatagaaaaagaagatgctttcgcatatgaagtattaaatgcgatggatcaatcgctt
aaaatgaatgatcatgctcgcttaaaaccatcttccaattcccttcatctcctttctggt
gaagaatggagtgaatggttttcagatgttccaaactggattgaaaacacagagcagatg
ctaaatagctgtaatgttactatagaaaaaacagctttgattatgcctaaatatccattg
cccgaaacgaagaattctaaggacttcttaagagagctttgtgaggatggactgagtaaa
cggataaaggaaattacgaaaccatatttagagcgtctaaattatgaattgtccattatt
aaccaaatgaactatgaggactattttttaatcgttcaggattttgtgaagttttctaaa
caacaaaacatattaaccggtccgggtcgtggatcttccgccagctcacttgtagcattt
tctttgaatattaccgacgtagatccccttcggtatggtttactttttgagcggttttta
aatccagaacgaattacaatgccggatattgatattgattttgcggattcgagaaggatg
gaagttattcaatatgtcgtagagaagtatggaaagaactatgtctcccaaattattacg
tttggtacattgtcagcaaaagctgctgctagagaagttgctagagtgtttggatttgag
tccaccaccttggaagctatttcttcttttatacctgcaaagcccggaatcacgttaaat
gaagcatatactatgtctgagaaattgcgtgagtttatacaaacagaagacattcgaaaa
aaatggtttcaagtcgcacttgctttagaggggctaccaaggaatgcctctacacatgca
gcaggtgtggtattatcaccagtttctttggtggatgttattcctattcaaggtgggcat
gaggatatctatttaactcaatggccgatgaaagaagtagaacaagttggattactcaaa
atggactttttagggctacgaaatttgaccattattgaaagaattttgaagatcataaat
tataagcaatcaaacccatttaaattaacggaaattccgctacatgatgaattgaccttt
cggctactccagcaaggagatactacaggtgtatttcaattagaatctgccggaatgcga
caagccctaaaacaaatcaatccaacaaagtttgaggatgtagttgcagtaaacgcatta
tttcgcccaggtccaatggaaagcatacctctatatgcaaaacgaaaagcagggcaggct
cccgtatcctacgaacatcccatattagagccgattttaaaagaaacctatggcattata
gtttaccaggagcagattatgcaaattgcctctaaaatggctggatttactttcggagaa
gccgatttgttacgtagagctgtgagcaaaaaaaatcgagaagttttacaaagtgaacgt
gtacattttgttcaaaaagctattctagaggggcattcggaacagtcagcttcagcagtt
tatgatttaatcgtccgatttgctgactatggttttccaaaaagtcatgctgtagcctat
agcgttatttcttttcaaatggcttatttaaaagcacatttcccagtagctttttatagt
gcattattgagcatagctaccggaaaccaagcgaagataaatgagttaatgatggaaatg
aaacaaaaagacatggcgattcttgctccctctatttttcgtagtcaacgcttcttcaca
gttgaaagaggaggagtgcggtttggtttacaagccataaaaggggtttcctataatttt
atacaaaaattattacagaaacgtatggaacgagaaaccaaatgggaagatatatttgac
ttagcttctgatttgtcagctgttcattttacaagaaaaaatgtagaaccattgatcaaa
gcaggcgctctagatgaattcggttttgagagatcgactctgctagctactttagacgcc
gctgttaaatatgctgaattgataagtcccacagaggaatcagatttatttggtggcgat
gcttcccactttggaaagtctaagtatataaaatcagatccacttccaattatggagaag
ctacaatttgaaaaagaagttttaggtcaatacttctcagagcatcctacagtttctaag
aagaaaatgttaacagataaatttataaatatttgggatatattgcagacaacaagagat
atgcctgtaaagatagttggactaatacaggacataaaacgaattcgtacaaaaaaagga
gaagcaatggcttttctaactgtacaggacgatactggtagcttgtcagtaacacttttt
ccagaggaatatgcaaaattcaatacgttattaaaagagcaggaaatgcttgttatcact
ggaaagtcagagcgtagaaacggtcgctctcaaattattactaaatatatggagaagtaa
DBGET
integrated database retrieval system
