Psychrobacillus sp. INOP01: KD050_03750
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Entry
KD050_03750 CDS
T09653
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psyb
Psychrobacillus sp. INOP01
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyb03016
]
KD050_03750 (thpR)
Enzymes [BR:
psyb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KD050_03750 (thpR)
Transfer RNA biogenesis [BR:
psyb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KD050_03750 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QUG42415
LinkDB
All DBs
Position
complement(749177..749740)
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AA seq
187 aa
AA seq
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MTKHYFIAIKIPEQVASAIIQERDKTNLHATHKTLPVAEDLHITLYYLGHVEESTLEQII
HSLHLLEWDSFELKTRGVAHFGNETTPRVVYTALEKSNPLQLLQQKIVRQLEDFIEVQKK
NEFTAHITIAKKWATKESLNLIEFTLPDLVFNVLSFSIYTINPNRSPRYEEISTVQWRRG
EKNGPTS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcattattttatcgctataaagattccggagcaggtagcatctgcaattatt
caggaacgtgataaaacaaatttacacgcgacacataaaacattaccagtagcagaggat
cttcatataacactctattatctagggcatgtagaagaaagtacattagaacaaataatt
cattctcttcacctgttagagtgggattcatttgaactgaaaacacgaggagtggcccat
tttggaaatgaaactactcctcgagttgtgtatactgccttggaaaaaagtaatcctttg
caattattacagcaaaaaattgtgcggcagttggaggattttatcgaagtacagaaaaaa
aacgaatttactgcccatattacaatcgcaaaaaaatgggctactaaagaatcgttaaat
ttaattgagtttacgctacctgatttggtatttaatgttttaagcttttctatttatacg
attaatccgaatcgttctccgcgttatgaagaaataagtacagttcagtggaggagggga
gaaaagaatggcccaactagttaa
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