KEGG   Psychrobacillus sp. INOP01: KD050_04645
Entry
KD050_04645       CDS       T09653                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psyb  Psychrobacillus sp. INOP01
Pathway
psyb03030  DNA replication
psyb03430  Mismatch repair
psyb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psyb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KD050_04645
   03430 Mismatch repair
    KD050_04645
   03440 Homologous recombination
    KD050_04645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psyb03032]
    KD050_04645
   03400 DNA repair and recombination proteins [BR:psyb03400]
    KD050_04645
Enzymes [BR:psyb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KD050_04645
DNA replication proteins [BR:psyb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KD050_04645
DNA repair and recombination proteins [BR:psyb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KD050_04645
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2 DUF3098
Other DBs
NCBI-ProteinID: QUG42566
LinkDB
Position
complement(911072..911794)
AA seq 240 aa
MAFEPFMQILRGIQGKRTNVGIGDVQSAQQMAFLRNLQKDMKKEDTLKILLDELKFVVFD
IETTGFNPEQGDDIISIGAIKMIGSSIQEDEIFYSLIYSEKEIPMDIVGLTGITNEQLKD
ARFIGDVLIEFLQFAKDCTLVAHHANHERNFMQHASTKLFRTPFKHRIVDTSFLYKIAEP
NIQLSSLEDLCKHNDIPIVRRHHALEDAKMTAKLWSIYVEKVKMLGCETLQDVYDQFARI
NT seq 723 nt   +upstreamnt  +downstreamnt
atggcgtttgaacctttcatgcaaatactaagaggtattcaaggaaaacgcacgaatgtt
ggcataggcgatgttcaaagcgcacaacaaatggcttttttaagaaacctgcaaaaagac
atgaaaaaagaggatactttaaaaattctcttggatgagctaaaatttgtagttttcgac
attgaaacgactggctttaacccagagcaaggggatgacattatctccattggtgcaata
aaaatgattggttcatccattcaagaggacgagattttctactcgcttatatactctgaa
aaagaaattccaatggatattgtcggactaactggtattacaaatgaacagttgaaggat
gcaagatttatcggggatgtactaattgaatttcttcaatttgcaaaagactgtacactt
gttgcgcatcatgcaaatcacgaaagaaattttatgcaacatgcaagtacaaagctattt
cgtacaccatttaagcatcgcatcgtcgatacgtcctttctatacaaaattgctgagcca
aatatacaactaagttcgttagaagatttgtgtaagcataacgatatcccaattgtaagg
cgccatcatgcattagaggacgccaaaatgaccgcaaaactttggagcatctatgtggaa
aaagttaaaatgcttggctgtgaaacgttacaggatgtatatgatcagtttgcaagaatc
taa

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