Psychrobacillus sp. INOP01: KD050_04900
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Entry
KD050_04900 CDS
T09653
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb02020
Two-component system
psyb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KD050_04900 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KD050_04900 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyb03021
]
KD050_04900 (rpoN)
Transcription machinery [BR:
psyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KD050_04900 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QUG42615
LinkDB
All DBs
Position
complement(965029..966336)
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AA seq
435 aa
AA seq
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MNLFIQQRQEMKMLMTVQLRQSIELLQYSTLELEQFIQQQELENPLIELEYKEEEQYFVE
KTNHSSIHTESKQNDYVQNQRIDFRYELFEQVKFTFSDIPTQRLLKTIIFNLDDSGYLHV
ETSTEKNCFSLNEQEIENGIHLLQQIGPLGIGARNLKECLQLQITYQYPGETLAKILVAD
YLHFLANHKWNDIAAGMNISLTKVKELNDFIKLLNPKPCAAFDTHVTEYICPDIIVEQKD
KHIIFQLNDRFLPTIRMNDYYAAFRKNKCETAKYIQPHYQHFQWLINSLEQRRNTINKIM
NILIKRQEEFFKKGFLYLQPLTLKEVADAIEMHESTVSRATTNKIIQTTFGTFDIRTLFA
SKLETADGESISQTKVKALLQNIIASENKLNPYSDQKIAEYFNVEKGISISRRTINKYRE
ELNIPSSSKRKEISV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttttattcagcaacggcaagaaatgaaaatgctaatgaccgttcagttaaga
cagtctattgaattacttcaatactccacgctagaactggaacaatttatacaacagcaa
gaattagaaaatccgcttattgagttagaatataaagaggaagaacaatactttgtagaa
aaaacaaatcattcttctattcatactgagagtaaacaaaacgattacgtgcaaaaccag
cgtattgactttcgctatgaattgtttgaacaggtaaagtttacattttcagatatccca
acgcaaagattattaaaaacgattatttttaatctggacgatagcggttatttacatgtt
gaaacatctactgaaaagaattgtttctcattaaatgagcaggaaatagaaaatgggatc
catttattacaacaaattggtccacttggcatcggtgctcgcaatttaaaagaatgtctc
caactacaaattacataccagtatcccggagagacgttagctaaaattttagtagcagat
tacttacattttctcgcaaatcataaatggaatgacatagctgctggcatgaatatttca
ttgactaaagtaaaagaattaaacgattttattaaacttttaaatcctaaaccttgtgct
gcatttgatacccatgtaacagagtatatatgccctgatattattgtggaacaaaaagac
aagcatattatctttcaattgaatgatcgctttttgcctactatacggatgaatgattat
tatgctgcttttcgcaagaacaaatgcgaaactgcaaaatatatacagcctcactatcaa
cattttcagtggttaataaatagccttgaacagcgtcgtaataccattaataaaattatg
aacatacttataaaaagacaagaagagtttttcaagaaaggttttttatacttgcaaccg
ttaacattaaaagaggtggcagatgctatcgaaatgcacgaatctaccgttagccgtgca
acaaccaataaaataattcaaactacatttggcacttttgatattagaactttgtttgca
tcaaaactagaaactgcagatggtgaaagtatttcacaaacgaaagtaaaagcgttattg
caaaatataatcgctagtgaaaataaactaaatccatattctgatcaaaaaattgctgaa
tattttaatgttgaaaaaggaatttcaatttctagaagaacgataaacaaatatagggaa
gaattgaacatcccttcttccagcaagagaaaagaaatttccgtttag
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