Psychrobacillus sp. INOP01: KD050_05585
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Entry
KD050_05585 CDS
T09653
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psyb
Psychrobacillus sp. INOP01
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyb03019
]
KD050_05585 (yhaM)
Messenger RNA biogenesis [BR:
psyb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KD050_05585 (yhaM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QUG42741
LinkDB
All DBs
Position
complement(1104585..1105523)
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AA seq
312 aa
AA seq
DB search
MKGITQLRVGDPVDHYLLIKQSTKGVTTVGKPFMSLILQDKSGDIEAKLWDTNEEHEKLY
GASQIVRVGGEIQDYRGKFQLRVKSIRPVKSEEPIAINDLVPSSEKPKEELMEELLQYFF
EMKNPLIQRITRHLMKKHQTSFMTFPAATKNHHDYASGLIDHVVSMLKLGKALCDLYPTL
NKDLLYAGIILHDIGKVIELSGPVATTYTIEGNLLGHITIMVNEISKAAEELEIEGEEVM
LLQHMVLSHHGKEEWGSPKRPALREAEMLHYIDNIDAKMNMLNRALDKTNPGEFSERLFP
LENRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcattacacaattacgagtaggtgatccagttgatcattacttacttataaag
caatcgacaaagggtgtaacaaccgttggtaaaccatttatgtcactgatattacaagat
aagagcggagatatcgaagcaaaactttgggatacaaatgaagaacatgaaaaactttat
ggtgctagtcaaattgttcgtgtaggtggagaaattcaagattatcgtggtaagttccaa
ttacgtgtaaaaagcattcgaccagtaaagtcagaagagcccattgcgataaatgattta
gtaccttcttctgaaaagccaaaagaagaattgatggaagagcttttacaatacttcttt
gaaatgaaaaatccattaatacaacgcattacgagacacttgatgaaaaaacaccagaca
tcatttatgacgttcccagcagcaactaaaaatcatcatgattatgcgtctggattaatc
gaccatgttgtgtctatgttaaagctaggaaaagcgctatgtgatttgtatccaacccta
aacaaagatcttctatacgctggaatcattttacatgatataggaaaggttatagagctt
tcaggtcctgttgcaacaacatacacaattgaagggaatttacttggacatattacgatc
atggtcaatgaaatttctaaagcagcagaagagctagaaatcgagggcgaagaagtaatg
cttcttcagcatatggttctctctcatcatggtaaagaagaatggggtagtccaaaacgt
cctgcactccgcgaagctgagatgctgcattatatcgataatattgatgcgaaaatgaat
atgctcaatcgtgcattagataaaacaaacccaggtgaattctccgaacgattattccct
cttgaaaatcgttcattttataagcctacatttgaataa
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