Psychrobacillus sp. INOP01: KD050_06850
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Entry
KD050_06850 CDS
T09653
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03420
Nucleotide excision repair
psyb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KD050_06850 (pcrA)
03430 Mismatch repair
KD050_06850 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_06850 (pcrA)
Enzymes [BR:
psyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KD050_06850 (pcrA)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KD050_06850 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KD050_06850 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
SNaCT11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QUG42954
LinkDB
All DBs
Position
complement(1346804..1349032)
Genome browser
AA seq
742 aa
AA seq
DB search
MEIIAKNLLNGMNKEQEEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIVEKEVYPSKIL
AITFTNKAAREMRERIDGLLGPGTGERMWVSTFHSMCVRILRRDIDRIGYTKNFSILDTS
DQLTVIKNVLKEQNIDSKQYDPRSMLNAISGAKNICIDSDTYRAQMNEMNPFEKTVANVY
QSYQKKLRKNQSLDFDDLIMLTLTLFKRVPDVLEFYQNKFQYIHVDEYQDTNKAQYELVQ
MLAKKFKNICVVGDSDQSIYRWRGADIQNILSFEKDYPNAKAIMLEQNYRSSQRILQAAN
DVIGNNTSRYPKVLRTENLEGEKLELFRAMNEHQEAQYVVQKIQELMELENRTLNDFAIL
YRTNAQSRVMEEVLVKSNMAYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRNIGATSFERMALYALDQDRSILDALNEVDFMGIPARAVNSVIQFQGLINNLTQMQEF
LSVTEIVEQVLDKTGYRTMLKNEKTIEAESRLENIEEFLSVTKAFEEKSEDKSLVAFLTD
LALISDIDKLDEDEDISKGNIILMTMHAAKGLEFPVVFIIGMEENIFPHSRSLGDDDEME
EERRLAYVGITRAEERLVITCAQSRTIFGRGSFNSPSRFIKEISDDIIEVVGWTKDIGKN
PEKHAKAIGNARKAVVTRPAYNESGGEKMGWQVGDKAAHKKWGEGMVVSVRGEGENTELD
IAFPSPTGIKRLLAKFAPIEKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatcgcgaaaaacttattgaatggtatgaataaagaacaagaagaagccgtg
aagacaacagaaggtccacttcttattatggcaggtgcaggatctggtaaaacgcgtgta
ttaacgcatcgaatcgcatacttgatcgtcgaaaaggaagtatatccatcgaaaatttta
gcgatcacctttacaaacaaagcagcaagagagatgcgagaacgtatagatggcttatta
ggaccaggaactggggaaagaatgtgggtatctacatttcactccatgtgcgtacgtatt
ttaagaagagatattgatcgaattggatacacaaaaaacttttcgatactagatacaagt
gaccaattgaccgttattaaaaatgtattaaaagagcaaaatattgattcgaaacaatat
gaccctcgctcgatgctaaatgccatcagtggcgccaaaaatatttgtattgattcggat
acatatcgtgcacagatgaatgagatgaatccgtttgaaaagacagtggcaaatgtgtat
caaagctatcaaaaaaaattgagaaagaaccaatcactcgattttgatgatttgatcatg
ctgacattgacattgttcaaacgagttcctgatgtacttgagttttaccaaaataaattc
cagtatatccatgtggatgaatatcaggatacgaacaaagctcagtacgaattagtgcaa
atgcttgctaaaaagttcaaaaatatttgtgtcgttggtgactcggatcaatcgatttat
cgctggcgtggagcagatattcagaatatcctatcgtttgaaaaggattaccctaacgca
aaagcgattatgttagaacaaaattatcgttcttctcaacgaatcctacaggctgcaaac
gacgtcattggaaataacacgagtagatatccaaaggttttacgaacggagaatctagaa
ggggaaaaactcgagttattccgtgcgatgaatgaacatcaggaagcacagtatgttgta
caaaaaatccaagaattaatggaattagaaaatcgtacattaaatgattttgcaattttg
tatcgcacgaatgctcaatctcgtgtgatggaggaagtgctcgttaaatcgaatatggca
tatacaattgtgggaggcacaaagttctatgatcgcaaagagattaaagacttacttgcc
tatttacgtttaatagccaataacgatgatgatttatcacttgctcgaattattaatgag
cctaaacgaaatatcggagcaacgtcttttgaacgtatggcgctctatgcactagaccaa
gaccgttcgattttagatgcattaaatgaagtcgacttcatggggataccagctcgtgct
gtaaattctgttattcaattccaagggctaatcaataatttgacccaaatgcaggaattt
ttgtctgtcacagaaattgttgagcaagtgcttgataaaacgggctaccgtacgatgcta
aaaaatgaaaagactattgaagcggaaagtcgattagaaaatattgaagagtttttatct
gtaacgaaagcatttgaggaaaagagtgaggacaagtcattagttgcatttttgacagat
ttggctcttatctccgatatagataaattggatgaagatgaagatatatctaaaggaaat
attattttaatgacgatgcatgcggcaaaaggcttggaattcccagtagtatttatcatt
ggaatggaagaaaatatcttcccacattcacgatcacttggtgatgatgatgaaatggaa
gaggaacgacgcctggcctacgtgggaatcacccgagcagaagaaagacttgtaattact
tgtgcgcagtcccgaactatatttggtcgtggcagttttaatagcccatctcgttttatc
aaagaaatttcagatgatattattgaggtcgttggttggactaaagacattggcaaaaat
ccagaaaaacatgcaaaagctattggtaatgctcgtaaagcagtagttactcgtccagca
tataacgaatcaggtggggagaaaatgggctggcaggttggtgataaagcggctcataaa
aaatggggcgaaggtatggttgtcagtgttcgtggcgaaggtgagaataccgagctagat
attgcatttccaagtcctacgggtattaagcgtctactcgctaaatttgccccaatcgaa
aaagtataa
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