Psychrobacillus sp. INOP01: KD050_08135
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Entry
KD050_08135 CDS
T09653
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
psyb
Psychrobacillus sp. INOP01
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyb03021
]
KD050_08135 (sigB)
Transcription machinery [BR:
psyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KD050_08135 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
DUF134
GerE
HNF-1_N
DUF1492
HTH_37
KORA
HTH_3
HTH_28
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QUG43176
LinkDB
All DBs
Position
complement(1619682..1620467)
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AA seq
261 aa
AA seq
DB search
MSNTSLPNKESKEKILEWIKEYQETESEEAQTNLVLNYTRLVESIARKYSNGKSHHEDIA
QVGMLGLLGAIRRYDPSFGKNFEAFAIPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIRA
AVETLTVEFQRSPIIPEIADFLGVEVEDVLEAMEMGKSYQALSMDHSLESDSDGSTITLF
DVIGKTDGEYEKTDQRLLVANALSVLSEREKEIIQLTYMEQLSQKETGDRLGISQMHVSR
IQRKAIKKLQETILSSGGVVK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacgtcccttcctaataaagaatcgaaagagaaaatattggaatggatcaag
gaatatcaagagacagaaagtgaagaggctcaaacaaatttagtgctaaattatactagg
ttggttgaatctattgctcgaaaatattctaatggtaaatcgcatcatgaggatatcgcg
caagtaggcatgcttggactccttggtgctattcgaagatatgatccatctttcggtaaa
aactttgaagcttttgcaattccgacaattataggcgagataaaacgctttttgagagat
aaaacgtgggctattcatgttccaagaaggattaaagagctaggaccacgtatccgagca
gcggttgaaacactaacagttgaatttcaacgttcacctattatccctgaaatagctgat
tttctaggggtagaagtagaagatgtactagaagctatggaaatgggtaaaagttatcaa
gcgctatctatggatcattcccttgaatcagattcggatggaagtacaattacattattt
gacgtaataggtaaaacggatggcgaatacgagaaaactgatcaacgtctacttgtagct
aatgcacttagtgttttatctgaacgagagaaagaaataattcaacttacatatatggag
cagcttagtcaaaaagaaacgggagatcgtctcggtatatcccaaatgcacgtatctaga
attcaacgcaaagctataaagaaattacaagagaccattttatcgtcaggtggagtagta
aaatga
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