Psychrobacillus sp. INOP01: KD050_10995
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Entry
KD050_10995 CDS
T09653
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psyb
Psychrobacillus sp. INOP01
Pathway
psyb03030
DNA replication
psyb03430
Mismatch repair
psyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KD050_10995 (dnaX)
03430 Mismatch repair
KD050_10995 (dnaX)
03440 Homologous recombination
KD050_10995 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyb03032
]
KD050_10995 (dnaX)
03400 DNA repair and recombination proteins [BR:
psyb03400
]
KD050_10995 (dnaX)
Enzymes [BR:
psyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KD050_10995 (dnaX)
DNA replication proteins [BR:
psyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KD050_10995 (dnaX)
DNA repair and recombination proteins [BR:
psyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KD050_10995 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
Rad17
AAA_14
AAA_19
AAA_7
AAA_24
DnaX_C
AAA_assoc_2
TIP49
AAA_16
AAA_2
Mg_chelatase
RNA_helicase
PIF1
DNA_pol3_delta_C
Glyco_tranf_2_5
RCF1-5-like_lid
nSTAND3
AAA_18
BRI3BP
Motif
Other DBs
NCBI-ProteinID:
QUG39875
LinkDB
All DBs
Position
2171263..2173011
Genome browser
AA seq
582 aa
AA seq
DB search
MSYQAFYRAYRPQSFAEVSGQTHIKQTLQNALLYNKTTHAYLFSGPRGTGKTSAAKIFAK
ALNCENGPAKEPCNSCETCKSITEGSNTDVIEFDAASNSRVEEMRDIIEKVRFAPSNAKY
KVYIIDEVHMLSTSAFNALLKTLEEPPAHAVFILATTEPHKIPLTIISRCQRFDFKRITS
ADIVSRMEEVLTDAKIEYDENVLKIIAQAAAGGMRDALSMLDQVVSFSVDKMTIEDALLV
TGSIGQDVFFQLADALIDKDIAKALACIEKLIEDGKDPVRLTEDFITFYRDLLVLLVAPE
QTELLEIATGDSMFLKLASKFQVDALYKGISILTNTQQEMRFSNHAKVYLETAIIRLAHV
PVEGTFSNGSNSELETKVKVLETQLQQLQQQLSQGMIPQVNAGTQDQPKRQRQKSSGGVK
VSSGRIQEILKTATKMDLQSIKSQWANILQQLQKSHAALLNDAEPVAASSNAFVLKFKYD
IHCQMAMENKTFSTSFPQLIANLTGTMYEVLYVPEENWLKIREDFIRQNGLKQGAQETEE
ENFSEPTESMELLQSMEQVSEDPLVVEAEKLFGKEFVEVQDD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtatcaagctttttaccgtgcttatcggccacaatcgtttgcagaagtgtctggt
caaactcatattaagcaaacccttcaaaatgccctcctttataacaaaacaacacatgcg
tatttattttcagggccacgtggaacaggtaaaacaagtgcagcaaaaatttttgcgaaa
gctttgaactgtgaaaatggtccagcaaaagaaccgtgcaattcatgtgaaacgtgtaaa
agtataacagaaggctcgaatacagatgtgattgagtttgacgcagcttctaactctcga
gtagaagaaatgcgtgatattattgaaaaagttcgatttgctccttctaatgctaaatat
aaagtgtatattatcgatgaagtgcatatgctctcaacgagtgcattcaacgcattattg
aaaacattagaagaaccacctgcacatgccgtgttcatattggcaacaacggagccacat
aaaattcccttaactattatttctagatgtcagcgtttcgattttaaacgaattacatct
gctgatatcgtttctcgtatggaagaagtattaacagatgctaaaattgaatacgatgaa
aatgtactaaaaattattgcacaagctgctgcgggtggtatgcgtgatgcacttagtatg
ctggatcaagttgtgtcatttagtgtagataaaatgacgattgaagatgcattacttgta
actggttctattggacaggatgtcttttttcaattagcagatgctttgatagacaaagat
atagcgaaggcattagcatgcatagaaaagttaatagaagatggaaaggatcctgttcga
ttaacggaggattttataaccttctatagagacttacttgttttacttgttgctccagaa
caaactgaattactagaaatagcaacaggtgactctatgtttttaaagcttgcttctaag
tttcaggtagacgccttatataaaggcatctccatcttgacgaatactcaacaagaaatg
cgtttttctaatcatgcgaaagtgtatctagaaactgcgataattcgattggcacatgtg
ccagtagaaggaacgttctcaaatgggagtaactcggagctagaaacaaaggtaaaagta
ctagaaactcaattacaacagttgcaacaacaattaagtcaagggatgattccgcaggta
aacgcaggaacacaagaccaaccgaagcgccaaagacaaaagtcatctggtggcgttaaa
gtatcaagcggtcgaatacaagaaattttgaaaacagccacgaaaatggatctccaatcg
attaaatctcagtgggcaaatattttacaacaattacaaaaatcacatgcagcattatta
aatgatgctgagccagtagcagcatcttctaatgcatttgtgttaaaattcaagtatgat
atacattgccaaatggctatggagaacaaaacattttccacttcatttccccagttaatt
gctaacttgacggggacgatgtatgaagttttatacgtaccagaggaaaattggttgaag
atccgagaagattttattagacaaaatggtttaaaacaaggtgctcaagagaccgaggaa
gaaaatttttctgaaccaactgaatcgatggaattattacaatcgatggaacaggtgtca
gaggatccgctggtagtggaagcagagaaattgtttggtaaagaatttgtagaagtacaa
gatgactaa
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